INTEGRALL

The Integron Database

Salmonella enterica subsp. enterica serovar Typhimurium
Accession Number: CP021464
Source: blood - Kenya
Journal: Unpublished
Published: 06-JUN-2018
Title: Comparative genomic and phenotypic analysis of invasive nontyphoidal Salmonella isolates from Siaya Kenya
Authors: Xie,G., Daligault,H., Davenport,K., Dighe,P., Kempaiah,P., Kubicek-Sutherland,J., Mukundan,H., Perkins,D., Doggett,N., McMahon,B.
Remarks: Class 1 integron. In369
Promoter: PcW
Gene Product Sequence
(6..731)
conjugal transfer protein TraT (6..731)
(1108..3270)
type IV conjugative transfer system coupling protein TraD (1108..3270)
(3677..3279)
PIN domain-containing protein (3677..3279)
(3907..3677)
antitoxin (3907..3677)
(3986..9244)
conjugative transfer relaxase/helicase TraI (3986..9244)
(9264..10004)
conjugal transfer pilus acetylase TraX (9264..10004)
(10059..10642)
conjugal transfer protein (10059..10642)
(10757..11041)
hypothetical protein (10757..11041)
(11054..11209)
disulfide bond formation protein DsbA (11054..11209)
(11375..11817)
phospholipase (11375..11817)
(11928..11716)
hypothetical protein (11928..11716)
(11996..12262)
transcriptional regulator (11996..12262)
(12385..12507)
DNA replication protein (12385..12507)
(12512..12589)
RepA leader peptide Tap (12512..12589)
(12570..13451)
replication initiation protein (12570..13451)
(13463..13678)
hypothetical protein (13463..13678)
(14353..14532)
hypothetical protein (14353..14532)
(15387..14629)
AraC family transcriptional regulator (15387..14629)
(16187..15630)
hypothetical protein (16187..15630)
(17176..16277)
hypothetical protein (17176..16277)
(17962..17309)
thiol:disulfide interchange protein (17962..17309)
(18557..18207)
helix-turn-helix transcriptional regulator (18557..18207)
(18754..18542)
regulator (18754..18542)
(20061..19186)
hypothetical protein (20061..19186)
(20871..20314)
hypothetical protein (20871..20314)
(21578..20886)
fimbrial chaperone protein (21578..20886)
(23979..21571)
outer membrane usher protein PefC (23979..21571)
(24725..24207)
fimbrial protein (24725..24207)
(25302..25000)
transcriptional regulator (25302..25000)
(25651..25451)
hypothetical protein (25651..25451)
(26021..26402)
TIGR00156 family protein (26021..26402)
(26571..26750)
hypothetical protein (26571..26750)
(26833..27015)
integrase (26833..27015)
(28251..27274)
protein RepA (28251..27274)
(29053..28757)
cytoplasmic protein (29053..28757)
(29173..29403)
hypothetical protein (29173..29403)
(30058..29537)
hypothetical protein (30058..29537)
(30734..30952)
plasmid maintenance protein CcdA (30734..30952)
(30954..31259)
plasmid maintenance protein CcdB (30954..31259)
(31261..31551)
cytoplasmic protein (31261..31551)
(31548..32069)
cytoplasmic protein (31548..32069)
(32104..32886)
phage integrase family protein (32104..32886)
(32895..33446)
EAL domain-containing protein (32895..33446)
(33459..33608)
diguanylate phosphodiesterase (33459..33608)
(33612..34121)
CaiF/GrlA family transcriptional regulator (33612..34121)
(34115..34600)
hypothetical protein (34115..34600)
(35320..35880)
inverse autotransporter beta-barrel domain-containing protein (35320..35880)
(36297..35947)
transposase (36297..35947)
(36354..36778)
IS200/IS605 family transposase (36354..36778)
(37556..36905)
Virulence protein SpvD (37556..36905)
(38542..37817)
MAPK phosphothreonine lyase (38542..37817)
(40598..38823)
mono(ADP-ribosyl)transferase SpvB (40598..38823)
(41547..40780)
virulence protein SpvA (41547..40780)
(41885..41721)
lysozyme (41885..41721)
(42952..42059)
virulence genes transcriptional activator (42952..42059)
(43561..44598)
IS630 family transposase (43561..44598)
(45812..44787)
AAA family ATPase (45812..44787)
(47409..45745)
IS481 family transposase (47409..45745)
(47932..47393)
DNA invertase (47932..47393)
(47957..48661)
IS6 family transposase IS15DIV (47957..48661)
(48726..48607)
adenine-specific DNA-methyltransferase (48726..48607)
(48671..51382)
Tn3 family transposase (48671..51382)
(51449..51826)
N-acetyltransferase (51449..51826)
(52686..52027)
type A-1 chloramphenicol O-acetyltransferase (52686..52027)
(52740..52931)
hypothetical protein (52740..52931)
(52910..53008)
glycosyl transferase (52910..53008)
(52965..53662)
IS1 family transposase (52965..53662)
(54280..53597)
hypothetical protein (54280..53597)
(54211..54462)
hypothetical protein (54211..54462)
(54748..54470)
hypothetical protein (54748..54470)
(54941..55558)
hypothetical protein (54941..55558)
(55660..57183)
IS21 family transposase IS1326 (55660..57183)
(57173..57955)
ATP-binding protein (57173..57955)
(58631..58131)
N-acetyltransferase (58631..58131)
(58650..58829)
hypothetical protein (58650..58829)
(59598..58759)
sulfonamide-resistant dihydropteroate synthase Sul1 (59598..58759)
(59939..59592)
quaternary ammonium compound efflux SMR transporter QacE delta 1 (59939..59592)
(60894..60103)
ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1 (60894..60103)
(61460..60987)
trimethoprim-resistant dihydrofolate reductase DfrA1 (61460..60987)
(61617..62735)
class 1 integron integrase IntI1 (61617..62735)
(63543..62707)
aminoglycoside O-phosphotransferase APH(6)-Id (63543..62707)
(64346..63543)
aminoglycoside O-phosphotransferase APH(3'')-Ib (64346..63543)
(65222..64407)
sulfonamide-resistant dihydropteroate synthase Sul2 (65222..64407)
(65246..65323)
transcriptional regulator (65246..65323)
(66381..65530)
replication protein (66381..65530)
(67137..66433)
IS6 family transposase IS15DIV (67137..66433)
(67585..67184)
IS91 family transposase (67585..67184)
(68595..67735)
class A broad-spectrum beta-lactamase TEM-1 (68595..67735)
(69155..68778)
resolvase (69155..68778)
(69180..69884)
IS6 family transposase IS15DIV (69180..69884)
(70935..70195)
carbonic anhydrase (70935..70195)
(72078..71590)
cytoplasmic protein (72078..71590)
(72337..73452)
hypothetical protein (72337..73452)
(73538..73954)
hypothetical protein (73538..73954)
(74138..74473)
hypothetical protein (74138..74473)
(74530..75131)
hypothetical protein (74530..75131)
(76069..75128)
ISNCY family transposase (76069..75128)
(76484..77689)
ParA family protein (76484..77689)
(77686..78663)
chromosome partitioning protein ParB (77686..78663)
(80019..78745)
DNA polymerase V subunit UmuC (80019..78745)
(80441..80019)
protein SamA (80441..80019)
(80952..81422)
hypothetical protein (80952..81422)
(81415..81771)
hypothetical protein (81415..81771)
(81810..82077)
hypothetical protein (81810..82077)
(82153..82833)
DNA methylase (82153..82833)
(82833..83054)
hypothetical protein (82833..83054)
(83110..83523)
hypothetical protein (83110..83523)
(83595..84359)
hypothetical protein (83595..84359)
(84536..84842)
hypothetical protein (84536..84842)
(84855..85289)
antirestriction protein (84855..85289)
(85356..85790)
hypothetical protein (85356..85790)
(86026..86349)
hypothetical protein (86026..86349)
(86555..86307)
hypothetical protein (86555..86307)
(86612..86810)
hypothetical protein (86612..86810)
(86891..87019)
single-stranded DNA-binding protein (86891..87019)
(87050..87568)
Single-stranded DNA-binding protein 2 (87050..87568)
(87623..87865)
hypothetical protein (87623..87865)
(87934..89931)
chromosome partitioning protein ParB (87934..89931)
psiB (89971..90405)
psiB conjugation system SOS inhibitor PsiB (89971..90405)
(90402..91139)
plasmid SOS inhibition protein A (90402..91139)
(91649..91918)
protein 32 protein of plasmid (91649..91918)
(91922..92050)
hypothetical protein (91922..92050)
(91965..92255)
hypothetical protein (91965..92255)
(93248..92778)
lytic transglycosylase (93248..92778)
(93465..93670)
hypothetical protein (93465..93670)
(93663..94043)
conjugal transfer protein TraM (93663..94043)
(94236..94922)
conjugal transfer protein TraJ (94236..94922)
(94923..95243)
conjugal transfer protein TraY (94923..95243)
(95285..95647)
type IV conjugative transfer system pilin TraA (95285..95647)
(95662..95973)
type IV conjugative transfer system protein TraL (95662..95973)
(95995..96561)
type IV conjugative transfer system protein TraE (95995..96561)
(96548..97288)
type-F conjugative transfer system secretin TraK (96548..97288)
(97288..98709)
conjugal transfer pilus assembly protein TraB (97288..98709)
(98699..99295)
conjugal transfer protein TraP (98699..99295)
(99273..99518)
conjugal transfer protein TrbD (99273..99518)
(99515..100030)
type IV conjugative transfer system protein TraV (99515..100030)
(100165..100386)
conjugal transfer protein TraR (100165..100386)
(100379..100846)
hypothetical protein (100379..100846)
(100963..101226)
multidrug transporter (100963..101226)
(101242..103890)
type IV secretion system protein TraC (101242..103890)
(103865..104251)
type-F conjugative transfer system protein TrbI (103865..104251)
(104248..104880)
conjugal transfer pilus assembly protein TraW (104248..104880)
(104877..105869)
conjugal transfer pilus assembly protein TraU (104877..105869)
(105888..106196)
hypothetical protein (105888..106196)
(106181..106819)
conjugal transfer pilus assembly protein TrbC (106181..106819)
(106856..107275)
HNH endonuclease (106856..107275)
(107272..109098)
conjugal transfer protein TraN (107272..109098)
(109109..109324)
conjugal transfer protein TrbE (109109..109324)
(109336..110085)
type-F conjugative transfer system pilin assembly protein TraF (109336..110085)
(110299..110592)
type-F conjugative transfer system pilin chaperone TraQ (110299..110592)
(110579..111127)
type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB (110579..111127)
(111117..112499)
conjugal transfer pilus assembly protein TraH (111117..112499)
(112496..115318)
conjugal transfer protein TraG (112496..115318)
(115334..115828)
entry exclusion protein (115334..115828)