INTEGRALL

The Integron Database

Escherichia coli
Accession Number: CP023850
Source: UTI - Sweden
Journal: Unpublished
Published: 03-DEC-2018
Title: Dynamics of resistance plasmids in extended spectrum beta-lactamase-producing Enterobacteriaceae in the gut microflora of patients during 1 year post UTI
Authors: Sandegren,L.
Remarks: Class 1 integron. In54
Promoter: PcH1
Gene Product Sequence
repA (15..1)
repA incFII family plasmid replication initiator RepA (15..1)
(70..1)
positive regulator of RepFIC repA1 expression (70..1)
(151..264)
replication protein RepA (151..264)
(555..295)
replication regulatory protein repA2 (555..295)
(1385..795)
DUF2726 domain-containing protein (1385..795)
(1632..1423)
transcriptional regulator (1632..1423)
(2214..1678)
endonuclease (2214..1678)
(2596..2384)
hypothetical protein (2596..2384)
(3285..2725)
fertility inhibition protein (3285..2725)
(4248..3388)
alpha/beta hydrolase (4248..3388)
traX (5053..4307)
traX protein TraX (5053..4307)
(10343..5073)
conjugative transfer relaxase/helicase TraI (10343..5073)
traD (12568..10343)
traD type IV conjugative transfer system coupling protein TraD (12568..10343)
(13555..12821)
complement resistance protein TraT (13555..12821)
(14081..13584)
entry exclusion protein (14081..13584)
(16919..14100)
conjugal transfer protein TraG (16919..14100)
(18289..16916)
conjugal transfer protein TraH (18289..16916)
(18701..18276)
conjugal transfer protein TrbF (18701..18276)
(19023..18649)
conjugal transfer protein TrbJ (19023..18649)
trbB (19465..18920)
trbB type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB (19465..18920)
traQ (19736..19452)
traQ type-F conjugative transfer system pilin chaperone TraQ (19736..19452)
(20201..19863)
conjugal transfer protein TrbA (20201..19863)
traF (20990..20217)
traF type-F conjugative transfer system pilin assembly protein TraF (20990..20217)
(21213..20953)
conjugal transfer protein TrbE (21213..20953)
traN (23045..21237)
traN type-F conjugative transfer system mating-pair stabilization protein TraN (23045..21237)
trbC (23692..23042)
trbC type-F conjugative transfer system pilin assembly protein TrbC (23692..23042)
(24000..23689)
hypothetical protein (24000..23689)
(25016..24024)
conjugal transfer protein TraU (25016..24024)
traW (25645..25013)
traW protein TraW (25645..25013)
trbI (26028..25642)
trbI type-F conjugative transfer system protein TrbI (26028..25642)
traC (28652..26025)
traC type IV secretion system protein TraC (28652..26025)
(29033..28812)
conjugal transfer protein TraR (29033..28812)
traV (29683..29168)
traV type IV conjugative transfer system protein TraV (29683..29168)
(29931..29680)
conjugal transfer protein TrbG (29931..29680)
(30277..29924)
conjugal transfer protein TrbD (30277..29924)
(30815..30231)
conjugal transfer protein TraP (30815..30231)
(32232..30805)
conjugal transfer protein TraB (32232..30805)
traK (32903..32232)
traK type-F conjugative transfer system secretin TraK (32903..32232)
traE (33513..32947)
traE protein TraE (33513..32947)
traL (33846..33535)
traL type IV conjugative transfer system protein TraL (33846..33535)
traA (34213..33851)
traA pilin (34213..33851)
(34474..34247)
relaxosome protein TraY (34474..34247)
(35314..34568)
conjugal transfer protein TraJ (35314..34568)
(35831..35448)
conjugal transfer protein TraM (35831..35448)
(36162..36764)
lytic transglycosylase (36162..36764)
(37993..37061)
DUF945 domain-containing protein (37993..37061)
(38290..38003)
hypothetical protein (38290..38003)
(38455..38315)
single-stranded DNA-binding protein (38455..38315)
(38354..38579)
hypothetical protein (38354..38579)
(38708..38517)
hypothetical protein (38708..38517)
(39367..39209)
protein hok (39367..39209)
(40366..39647)
plasmid SOS inhibition protein A (40366..39647)
psiB (40797..40363)
psiB conjugation system SOS inhibitor PsiB (40797..40363)
(42810..40852)
hypothetical protein (42810..40852)
(43102..42869)
DUF905 domain-containing protein (43102..42869)
(43685..43158)
single-stranded DNA-binding protein (43685..43158)
(43851..43711)
single-stranded DNA-binding protein (43851..43711)
(43750..43975)
hypothetical protein (43750..43975)
(44104..43913)
hypothetical protein (44104..43913)
(44027..44251)
hypothetical protein (44027..44251)
(44403..44155)
hypothetical protein (44403..44155)
(44555..44325)
hypothetical protein (44555..44325)
(45118..44555)
class I SAM-dependent methyltransferase (45118..44555)
(46526..45165)
DUF3560 domain-containing protein (46526..45165)
(46808..46578)
hypothetical protein (46808..46578)
(47149..47030)
single-stranded DNA-binding protein (47149..47030)
(47322..47570)
hypothetical protein (47322..47570)
(48034..47843)
hypothetical protein (48034..47843)
(48453..48031)
DUF1380 domain-containing protein (48453..48031)
(48802..48500)
antirestriction protein (48802..48500)
(49469..48898)
hypothetical protein (49469..48898)
(50118..49893)
hypothetical protein (50118..49893)
(50603..50169)
DUF1380 domain-containing protein (50603..50169)
(50838..50617)
hypothetical protein (50838..50617)
(51522..50839)
DNA methylase (51522..50839)
(51903..51599)
hypothetical protein (51903..51599)
(52809..51907)
DUF1281 domain-containing protein (52809..51907)
(53119..52847)
hypothetical protein (53119..52847)
(53594..53157)
hypothetical protein (53594..53157)
(54647..53676)
plasmid-partitioning protein (54647..53676)
(55813..54647)
protein SopA (55813..54647)
(57156..56401)
replication initiation protein (57156..56401)
(58736..57930)
phage integrase family protein (58736..57930)
(59042..58737)
toxin CcdB (59042..58737)
(59262..59044)
antitoxin CcdA (59262..59044)
(59808..60320)
hypothetical protein (59808..60320)
(61505..60354)
hypothetical protein (61505..60354)
(61567..61992)
IS66 family insertion sequence hypothetical protein (61567..61992)
(61989..62339)
IS66 family insertion sequence hypothetical protein (61989..62339)
(62370..63983)
IS66 family transposase ISEc23 (62370..63983)
(64967..64194)
hypothetical protein (64967..64194)
(65480..64980)
hypothetical protein (65480..64980)
(65745..65975)
AbrB/MazE/SpoVT family DNA-binding domain-containing protein (65745..65975)
(65972..66388)
PIN domain-containing protein (65972..66388)
(70257..66433)
pcar (70257..66433)
(70608..70838)
AbrB/MazE/SpoVT family DNA-binding domain-containing protein (70608..70838)
(70835..71251)
PIN domain-containing protein (70835..71251)
(71326..72891)
ATP-dependent endonuclease (71326..72891)
(72876..73898)
DNA helicase UvrD (72876..73898)
(74023..74217)
hypothetical protein (74023..74217)
(74849..74152)
IS1 family transposase (74849..74152)
(74904..74806)
glycosyl transferase (74904..74806)
(75022..74883)
ABC transporter ATP-binding protein (75022..74883)
(75445..75138)
type II toxin-antitoxin system ParD family antitoxin (75445..75138)
(75641..75447)
hypothetical protein (75641..75447)
(75938..77107)
hypothetical protein (75938..77107)
(77140..77268)
IS481 family transposase (77140..77268)
(77596..77303)
hypothetical protein (77596..77303)
(77977..77702)
type II toxin-antitoxin system RelE/ParE family toxin (77977..77702)
(78261..77977)
ribbon-helix-helix protein, CopG family (78261..77977)
(78866..79618)
IclR family transcriptional regulator (78866..79618)
kdgT (80629..79664)
kdgT 2-keto-3-deoxygluconate transporter (80629..79664)
(81042..80662)
reactive intermediate/imine deaminase (81042..80662)
(81957..81067)
dihydrodipicolinate synthase family protein (81957..81067)
(82384..82190)
hypothetical protein (82384..82190)
(82358..82798)
alcohol dehydrogenase (82358..82798)
(82941..83807)
sugar ABC transporter permease (82941..83807)
(83797..84684)
carbohydrate ABC transporter permease (83797..84684)
(84695..85519)
phosphodiesterase (84695..85519)
(85525..86598)
ABC transporter ATP-binding protein (85525..86598)
(86591..87901)
ABC transporter substrate-binding protein (86591..87901)
(88268..87960)
IS4 family transposase (88268..87960)
(88578..88345)
hypothetical protein (88578..88345)
(89652..88600)
IS3 family transposase (89652..88600)
(89717..90421)
IS6 family transposase IS15DIV (89717..90421)
(91009..90479)
histidine acid phosphatase (91009..90479)
(91616..91131)
hypothetical protein (91616..91131)
(92195..91641)
TlpA family protein disulfide reductase (92195..91641)
(92808..92113)
ABC transporter ATP-binding protein (92808..92113)
(93973..92813)
ABC transporter permease (93973..92813)
(95216..93933)
ABC transporter permease (95216..93933)
(96598..95219)
DUF2318 domain-containing protein (96598..95219)
(97229..96702)
iron transporter (97229..96702)
(99216..97270)
iron permease (99216..97270)
(99344..99159)
hypothetical protein (99344..99159)
(100318..99503)
NADH:ubiquinone reductase (Na(+)-transporting) subunit C (100318..99503)
(100544..101248)
IS6 family transposase IS15DIV (100544..101248)
(101468..101139)
hypothetical protein (101468..101139)
(102208..101594)
DUF3330 domain-containing protein (102208..101594)
(103160..102147)
integron integrase (103160..102147)
(103318..103791)
trimethoprim-resistant dihydrofolate reductase DfrA17 (103318..103791)
(103922..104710)
ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5 (103922..104710)
(104916..105263)
quaternary ammonium compound efflux SMR transporter QacE delta 1 (104916..105263)
(105257..106096)
sulfonamide-resistant dihydropteroate synthase Sul1 (105257..106096)
(106205..106026)
hypothetical protein (106205..106026)
(106224..106427)
hypothetical protein (106224..106427)
(106583..107788)
chromate transporter (106583..107788)
(107799..108104)
PadR family transcriptional regulator (107799..108104)
(108302..108120)
resolvase (108302..108120)
(108331..109095)
IS6 family transposase (108331..109095)
(109642..109286)
hypothetical protein (109642..109286)
(110172..109588)
TetR/AcrR family transcriptional regulator (110172..109588)
(111410..110172)
MFS transporter (111410..110172)
(112312..111407)
Mph(A) family macrolide 2'-phosphotransferase (112312..111407)
(112375..112488)
adenine-specific DNA-methyltransferase (112375..112488)
(113138..112434)
IS6 family transposase IS15DIV (113138..112434)
(113245..114105)
aminoglycoside N-acetyltransferase AAC(3)-IIa (113245..114105)
(114118..114660)
tunicamycin resistance protein (114118..114660)
(114731..115800)
IS3 family transposase (114731..115800)
(116558..115854)
IS6 family transposase IS15DIV (116558..115854)
(118863..116623)
Tn3 family transposase (118863..116623)
(118880..119212)
cupin fold metalloprotein, WbuC family (118880..119212)
(120134..119259)
class A extended-spectrum beta-lactamase CTX-M-15 (120134..119259)
(121652..120390)
IS1380 family transposase ISEc9 (121652..120390)
(122064..121834)
hypothetical protein (122064..121834)
(122035..122739)
IS6 family transposase IS15DIV (122035..122739)
(123233..122793)
chloramphenicol acetyltransferase CAT (123233..122793)
(124201..123371)
oxacillin-hydrolyzing class D beta-lactamase OXA-1 (124201..123371)
aacA4 (124886..124332)
aacA4 fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5 (124886..124332)
(125734..125030)
IS6 family transposase IS15DIV (125734..125030)
(125800..127314)
Tn3 family transposase (125800..127314)
(127356..127598)
relaxase (127356..127598)
(128307..127630)
TetR family transcriptional regulator (128307..127630)
(128386..129585)
tetracycline efflux MFS transporter Tet(A) (128386..129585)
(130501..129617)
EamA family transporter (130501..129617)
(131031..130639)
cysteine hydrolase (131031..130639)
(131035..131784)
Tn3 family transposase (131035..131784)
(132413..131808)
DNA resolvase (132413..131808)
(132508..135405)
Tn3 family transposase (132508..135405)
(136006..135542)
mRNA interferase PemK (136006..135542)
(136879..136226)
CPBP family intramembrane metalloprotease (136879..136226)
(137455..137069)
hypothetical protein (137455..137069)