INTEGRALL

The Integron Database

Pseudomonas putida
Accession Number: KF840720
Source: Argentina: Santa Fe, Rosario
Journal: Unpublished
Published: 16-DEC-2013
Title: The complete nucleotide sequence of the carbapenem resistance-conferring conjugative plasmid pLD209 from a Pseudomonas putida clinical strain revealed a chimeric design formed by modules derived from both environmental and clinical bacteria
Authors: Marchiaro,P.M., Brambilla,L., Moran-Barrio,J., Revale,S., Pasteran,F., Vila,A.J., Viale,A.M., Limansky,A.S.
Remarks: Class 1 integron. In41. Genbank AN GQ857074 is redundant and more restrictive sequence
Gene Product Sequence
(228..830)
hypothetical protein (228..830)
intI1 (2228..1215)
intI1 IntI1 (2228..1215)
blaVIM-2 (2395..3195)
blaVIM-2 VIM-2 (2395..3195)
aacA4 (3355..3852)
aacA4 AacA4 (3355..3852)
tniC (4638..4015)
tniC TniC (4638..4015)
tniQ (5917..4700)
tniQ TniQ (5917..4700)
tniB (6822..5914)
tniB TniB (6822..5914)
tniA (8504..6825)
tniA TniA (8504..6825)
tnpC (8773..9135)
tnpC TnpC (8773..9135)
(9138..9365)
hypothetical protein (9138..9365)
(9719..9534)
hypothetical protein (9719..9534)
(10031..9819)
hypothetical protein (10031..9819)
(10348..10181)
hypothetical protein (10348..10181)
repA (10965..12212)
repA RepA (10965..12212)
trfB (12490..12813)
trfB TrfB (12490..12813)
parA (12810..13616)
parA ParA (12810..13616)
parB (13609..14673)
parB ParB-like partition protein (13609..14673)
(14735..14923)
putative membrane protein (14735..14923)
(15106..15384)
hypothetical protein (15106..15384)
mpR (16685..15975)
mpR MpR (16685..15975)
mobC (17256..17813)
mobC MobC (17256..17813)
virD2 (17800..18831)
virD2 VirD2 (17800..18831)
(18911..19162)
hypothetical protein (18911..19162)
(19957..20166)
hypothetical protein (19957..20166)
res (20375..21010)
res resolvase (20375..21010)
(21063..21263)
hypothetical protein (21063..21263)
(21472..21705)
hypothetical protein (21472..21705)
(21984..22364)
hypothetical protein (21984..22364)
(23041..22412)
putative lytic transglycosylase protein (23041..22412)
(24942..23038)
TraC4 (24942..23038)
virD4 (27133..25223)
virD4 VirD4 (27133..25223)
virB11 (28189..27143)
virB11 DNA transfer ATPase VirB11 (28189..27143)
virB10 (29394..28186)
virB10 putative conjugal transfer protein VirB10 (29394..28186)
virB9 (30206..29397)
virB9 conjugative transfer protein VirB9 (30206..29397)
virB8 (31102..30209)
virB8 VirB8 protein (31102..30209)
virB7 (31287..31102)
virB7 putative conjugal transfer protein VirB7 (31287..31102)
virB6 (32370..31420)
virB6 TrbL/VirB6 plasmid conjugal transfer protein (32370..31420)
virB5 (33312..32581)
virB5 DNA transfer protein VirB5 (33312..32581)
virB4 (35744..33309)
virB4 type IV secretion/conjugal transfer ATPase, VirB4 family protein (35744..33309)
virB3 (36109..35741)
virB3 Type IV secretory pathway, VirB3-like protein (36109..35741)
virB2 (36460..36137)
virB2 TrbC/VIRB2 family protein (36460..36137)
(36806..36438)
hypothetical protein (36806..36438)
(37386..36826)
hypothetical protein (37386..36826)
(38403..37474)
hypothetical protein (38403..37474)