INTEGRALL

The Integron Database

Escherichia coli
Accession Number: KP198616
Source: n.m.
Journal: Diagn. Microbiol. Infect. Dis. (2015) In press
Published: 06-MAR-2015
Title: Prevalence and characterization of hybrid blaCTX-M among Escherichia coli isolates from livestock and other animals
Authors: Ho,P.-L., Liu,M.C., Lo,W.-U., Lai,E.L., Lau,T.C., Law,O.-K., Chow,K.-H.
Remarks: Class1 integrons In0
Promoter: PcH1
Gene Product Sequence
inc (363..292)
repY (378..467)
repY RepY protein (378..467)
repZ (455..1486)
repZ RepZ protein (455..1486)
yacA (2395..2664)
yacA YacA protein (2395..2664)
yacB (2661..2942)
yacB YacB protein (2661..2942)
yacC (2982..3830)
yacC YacC protein (2982..3830)
yadA (3971..4333)
yadA YadA protein (3971..4333)
(4466..4621)
truncated transposase for insertion sequence element IS6100 in transposon (4466..4621)
mphR (5524..5114)
mphR transcriptional regulator MphR (5524..5114)
(6666..5698)
truncated Mrx protein (6666..5698)
mph2 (7838..6933)
mph2 macrolide 2-phosphotransferase protein, macrolide resistance protein (7838..6933)
tnpA (8565..7960)
tnpA truncated transposase for insertion sequence element IS26 in transposon (8565..7960)
fosA3 (9055..9471)
fosA3 fosfomycin resistance protein FosA (9055..9471)
(9994..9476)
Orf1 (9994..9476)
(10782..9994)
Orf2 (10782..9994)
(11152..10802)
truncated transcriptional regulator (11152..10802)
tnpA (11986..11282)
tnpA transposase for insertion sequence element IS26 in transposon (11986..11282)
(12257..12955)
truncated IntI1 (12257..12955)
(13002..13613)
truncated transposase for insertion sequence element IS26 in transposon (13002..13613)
yafA (14276..13881)
yafA YafA protein (14276..13881)
yafB (14895..14293)
yafB YafB protein (14895..14293)
(15171..15052)
hypothetical protein (15171..15052)
yagA (15249..16595)
yagA YagA protein (15249..16595)
(16604..16768)
hypothetical protein (16604..16768)
cib (16874..18754)
cib colicin Ib protein (16874..18754)
(19119..18772)
colicin transporter (19119..18772)
(19269..19138)
hypothetical protein (19269..19138)
(19238..19558)
hypothetical protein (19238..19558)
ydeA (20196..19606)
ydeA YdeA protein (20196..19606)
ydfA (20453..20196)
ydfA YdfA protein (20453..20196)
(20605..20438)
hypothetical protein (20605..20438)
(20756..20607)
hypothetical protein (20756..20607)
(20780..21805)
hypothetical protein (20780..21805)
(23078..22824)
hypothetical protein (23078..22824)
ybeB (23189..24070)
ybeB YbeB protein (23189..24070)
tnpA (24281..25543)
tnpA transposase for insertion sequence element ISEcp1 in transposon (24281..25543)
blaCTX-M-123 (25796..26671)
blaCTX-M-123 CTX-M-123 (25796..26671)
(26987..26718)
putative transposase (26987..26718)
yajA (27429..27187)
yajA YajA protein (27429..27187)
(27680..27426)
Orf11 (27680..27426)
(28219..27677)
Orf10 (28219..27677)
dnaJ (28838..28323)
dnaJ putative DnaJ-class molecular chaperone (28838..28323)
yagA (29571..29242)
yagA YagA protein (29571..29242)
yedA (30347..30799)
yedA YedA protein (30347..30799)
resD (30801..31580)
resD ResD protein (30801..31580)
yefA (31727..32404)
yefA ParB-like nuclease YefA (31727..32404)
yegA (32491..32796)
yegA YegA protein (32491..32796)
parA (33213..34193)
parA plasmid partition protein A (33213..34193)
parB (34186..34602)
parB plasmid partition protein B (34186..34602)
impB (35878..34604)
impB stable plasmid inheritance protein B (35878..34604)
impA (36315..35878)
impA stable plasmid inheritance protein A (36315..35878)
impC (36560..36312)
impC stable plasmid inheritance protein C (36560..36312)
yfaA (36671..36940)
yfaA YfaA protein (36671..36940)
yfaB (36954..37880)
yfaB YfaB protein (36954..37880)
yfbA (37884..38189)
yfbA YfbA protein (37884..38189)
yfbB (38264..38947)
yfbB YfbB protein (38264..38947)
yfcA (38948..39169)
yfcA YfcA protein (38948..39169)
yfcB (39182..39616)
yfcB YfcB protein (39182..39616)
yfdA (39667..40437)
yfdA YfdA protein (39667..40437)
yfeA (40412..40888)
yfeA YfeA protein (40412..40888)
yfeB (40854..41279)
yfeB YfeB protein (40854..41279)
yfeC (41326..41748)
yfeC YfeC protein (41326..41748)
yffA (41745..41936)
yffA YffA protein (41745..41936)
(43881..42214)
group II intron-associated polymerase (43881..42214)
ssb (45049..45576)
ssb single-stranded DNA binding protein (45049..45576)
yfhA (45931..47889)
yfhA YfhA protein (45931..47889)
psiB (47944..48378)
psiB PsiB protein (47944..48378)
psiA (48375..49094)
psiA PsiA protein (48375..49094)
ygaA (49091..49687)
ygaA YgaA protein (49091..49687)
ygbA (49759..50229)
ygbA YgbA protein (49759..50229)
ardA (50150..50650)
ardA antirestriction protein ArdA (50150..50650)
ygcA (51379..51813)
ygcA YgcA protein (51379..51813)
ygdA (51907..52173)
ygdA YgdA protein (51907..52173)
ygdB (52238..53140)
ygdB YgdB protein (52238..53140)
ygeA (53679..53428)
ygeA YgeA protein (53679..53428)
ygfA (53799..54134)
ygfA YgfA protein (53799..54134)
ygfB (54259..55107)
ygfB YgfB protein (54259..55107)
yggA (55527..55192)
yggA YggA protein (55527..55192)
nikA (55761..56093)
nikA nickel ABC transporter, periplasmic nickel-binding protein NikA (55761..56093)
nikB (56104..58803)
nikB NikB relaxase (56104..58803)
trbC (61131..58840)
trbC TrbC protein (61131..58840)
trbB (62194..61124)
trbB TrbB protein (62194..61124)
trbA (63421..62213)
trbA TrbA protein (63421..62213)
pndC (63655..63858)
pndC plasmid stability PndC protein (63655..63858)
pndA (63710..63865)
pndA post-segregation killing PndA protein (63710..63865)
excA (66358..65696)
excA surface exclusion protein ExcA (66358..65696)
excB (66139..65696)
excB surface exclusion protein ExcB (66139..65696)
traY (68666..66429)
traY IncI1 plasmid conjugative transfer integral membrane protein TraY (68666..66429)
traX (69278..68694)
traX IncI1 plasmid conjugative transfer protein TraX (69278..68694)
traW (70509..69307)
traW IncI1 plasmid conjugative transfer protein TraW (70509..69307)
traV (71090..70476)
traV IncI1 plasmid conjugative transfer protein TraV (71090..70476)
traU (74134..71090)
traU IncI1 plasmid conjugative transfer protein TraU (74134..71090)
traT (75024..74224)
traT IncI1 plasmid conjugative transfer protein TraT (75024..74224)
traS (75196..75008)
traS IncI1 plasmid conjugative transfer protein TraS (75196..75008)
traR (75664..75260)
traR IncI1 plasmid conjugative transfer protein TraR (75664..75260)
traQ (76242..75715)
traQ IncI1 plasmid conjugative transfer protein TraQ (76242..75715)
traP (76946..76242)
traP IncI1 plasmid conjugative transfer protein TraP (76946..76242)
traO (78235..76946)
traO IncI1 plasmid conjugative transfer protein TraO (78235..76946)
traN (79221..78238)
traN IncI1 plasmid conjugative transfer protein TraN (79221..78238)
traM (79924..79232)
traM IncI1 plasmid conjugative transfer protein TraM (79924..79232)
traL (80268..79921)
traL IncI1 plasmid conjugative transfer protein TraL (80268..79921)
sogL (84053..80286)
sogL SogL DNA primase (84053..80286)
sogS (82820..80286)
sogS SogS DNA primase (82820..80286)
nuc (84694..84143)
nuc plasmid conjugative transfer endonuclease (84694..84143)
traK (84999..84709)
traK IncI1 plasmid conjugative transfer protein TraK (84999..84709)
traJ (86143..85760)
traJ plasmid transfer ATPase TraJ (86143..85760)
traI (86958..86140)
traI IncI1 plasmid conjugative transfer protein TraI (86958..86140)
traH (87413..86955)
traH IncI1 plasmid conjugative transfer protein TraH (87413..86955)
traG (88392..87808)
traG IncI1 plasmid conjugative transfer protein TraG (88392..87808)
traF (89654..88452)
traF IncI1 plasmid conjugative transfer protein TraF (89654..88452)
traE (90564..89740)
traE IncI1 plasmid conjugative transfer protein TraE (90564..89740)
rci (91869..90715)
rci shufflon-specific DNA recombinase (91869..90715)
shfA' (93857..92583)
shfA' shufflon protein A' (93857..92583)
pilU (94513..93857)
pilU PilU protein (94513..93857)
pilT (95058..94498)
pilT IncI1 plasmid conjugative transfer putative membrane protein PilT (95058..94498)
pilS (95682..95068)
pilS IncI1 plasmid conjugative transfer prepilin PilS (95682..95068)
pilR (96797..95700)
pilR IncI1 plasmid conjugative transfer inner membrane protein PilR (96797..95700)
pilQ (98363..96810)
pilQ IncI1 plasmid conjugative transfer ATPase PilQ (98363..96810)
pilP (98826..98374)
pilP IncI1 plasmid pilus assembly protein PilP (98826..98374)
pilO (100108..98813)
pilO IncI1 plasmid pilus assembly protein PilO (100108..98813)
pilN (101783..100101)
pilN IncI1 plasmid conjugative transfer lipoprotein PilN (101783..100101)
pilM (102234..101797)
pilM IncI1 plasmid conjugative transfer protein PilM (102234..101797)
pilL (103301..102234)
pilL IncI1 plasmid conjugative transfer protein PilL (103301..102234)
pilK (103928..103335)
pilK IncI1 plasmid conjugative transfer protein PilK (103928..103335)
pilJ (104056..103925)
pilJ PilJ protein (104056..103925)
pilI (104651..104397)
pilI PilI type IV pilus biogenesis protein (104651..104397)
(105364..104813)
hypothetical protein (105364..104813)
traC (106220..105537)
traC IncI1 plasmid conjugative transfer protein TraC (106220..105537)
traB (107007..106474)
traB IncI1 plasmid conjugative transfer NusG-type transcription antiterminator TraB (107007..106474)
traA (107736..107449)
traA IncI1 plasmid conjugative transfer protein TraA (107736..107449)