INTEGRALL

The Integron Database

Escherichia coli
Accession Number: KY019259
Source: chicken meat
Journal: Unpublished
Published: 27-MAR-2017
Title: Complete sequence of plasmid pHNYJC8
Authors: Wang,J., Zhi,C.P., Chen,X.J., Guo,Z.W., Liu,J.H.
Remarks: Class 1 integrons. In1185, In641
Promoter: PcS, PcH1
Gene Product Sequence
repHI2 (1..1089)
repHI2 IncHI2 plasmid replication protein RepHI2 (1..1089)
hypothetical protein (1486..2061)
putative periplasmic protein (5507..3087)
hypothetical protein (6583..5972)
hypothetical protein (6867..6604)
hypothetical protein (7722..6961)
hypothetical protein (8567..7803)
hypothetical protein (8775..8891)
hypothetical protein (8888..9055)
hypothetical protein (9128..11518)
hypothetical protein (11953..12423)
putative plasmid maintenance protein (12473..12769)
hypothetical protein (13012..13959)
hypothetical protein (14367..14744)
hypothetical protein (14839..15267)
hypothetical protein (15332..15589)
hypothetical protein (15745..16353)
putative DNA methyltransferase (16522..17772)
hypothetical protein (18053..18199)
hypothetical protein (18615..18941)
hypothetical protein (19007..19264)
hypothetical protein (19491..20282)
hypothetical protein (20334..20783)
hypothetical protein (20956..23340)
hypothetical protein (23590..23829)
hypothetical protein (23892..24203)
hypothetical protein (24200..24388)
hypothetical protein (24449..24982)
hypothetical protein (25097..25705)
hypothetical protein (25933..26160)
hypothetical protein (26340..26660)
hypothetical protein (27176..27487)
hypothetical protein (27492..27983)
hypothetical protein (28063..28356)
putative membrane protein (28536..28739)
hypothetical protein (28794..29018)
hypothetical protein (29058..29258)
hypothetical protein (30167..30448)
hypothetical protein (30664..31269)
insA (31602..32123)
insA transposase A (31602..32123)
insB (32120..32971)
insB transposase B (32120..32971)
hypothetical protein (33515..33637)
hypothetical protein (33850..33647)
hypothetical protein (34252..33896)
hypothetical protein (34908..34306)
hypothetical protein (35949..35005)
hypothetical protein (36405..36635)
putative DNA-binding protein (37051..38235)
hypothetical protein (38301..38582)
hypothetical protein (38657..38773)
hypothetical protein (38809..39045)
hypothetical protein (39166..39462)
hypothetical protein (39507..39944)
hypothetical protein (40012..40548)
hypothetical protein (40713..41081)
hypothetical protein (41273..41422)
hypothetical protein (41514..41816)
putative membrane protein (42173..42457)
hypothetical protein (42523..42876)
putative periplasmic protein (43894..43163)
putative peptidase (45077..43896)
traJ (45750..45088)
traJ IncHI2 plasmid conjugative transfer protein TraJ (45750..45088)
hypothetical protein (46846..45737)
traG (48930..46846)
traG IncHI2 plasmid conjugative transfer protein TraG (48930..46846)
traI (52076..48930)
traI IncHI2 plasmid conjugative transfer protein TraI (52076..48930)
hypothetical protein (52823..52086)
traH (53305..52820)
traH IncHI2 plasmid conjugative transfer protein TraH (53305..52820)
hypothetical protein (53517..53356)
trhR (54064..54864)
trhR IncHI2 plasmid conjugative transfer protein TrhR (54064..54864)
trhY (54866..55378)
trhY IncHI2 plasmid conjugative transfer protein TrhY (54866..55378)
trhF (55972..57018)
trhF IncHI2 plasmid conjugative transfer pilus assembly protein TrhF (55972..57018)
trhH (57008..58423)
trhH IncHI2 plasmid conjugative transfer pilus assembly protein TrhH (57008..58423)
trhG (58432..62385)
trhG IncHI2 plasmid conjugative transfer protein TrhG (58432..62385)
hypothetical protein (62566..63855)
hypothetical protein (64481..63963)
membrane-bound lytic murein transglycosylase D precursor (65151..64612)
dsbC (65299..66048)
dsbC Thiol:disulfide interchange protein DsbC (65299..66048)
hypothetical protein (66073..66465)
hypothetical protein (66499..66921)
hypothetical protein (67592..66981)
outer membrane protein assembly factor YaeT precursor (67699..68508)
umuC (69813..68554)
umuC Error-prone, lesion bypass DNA polymerase V (UmuC) (69813..68554)
umuD (70231..69797)
umuD Error-prone repair protein UmuD (70231..69797)
hypothetical protein (70425..71042)
hypothetical protein (71192..71548)
tnpA (71849..72553)
tnpA transposase (71849..72553)
oqxR (72655..73134)
oqxR transcriptional regulator (72655..73134)
oqxB (76357..73205)
oqxB RND multidrug efflux transporter OqxB (76357..73205)
oqxA (77556..76381)
oqxA RND multidrug efflux membrane fusion protein OqxA (77556..76381)
tnpA (77876..78580)
tnpA transposase (77876..78580)
NimC/NimA family protein (78915..79307)
blms (79911..79627)
blms bleomycin resistance protein (79911..79627)
tnpA (80911..80207)
tnpA transposase (80911..80207)
sul1 (82647..83486)
sul1 dihydropteroate synthase (82647..83486)
tnpA (84042..84746)
tnpA transposase (84042..84746)
aadA2 (85375..84799)
gcuF (85683..85393)
gcuF hypothetical protein (85683..85393)
dfrA12 (86292..85795)
dfrA12 dihydrofolate reductase (86292..85795)
tnpA (86697..87401)
tnpA transposase (86697..87401)
aphA1 (88406..87591)
aphA1 aminoglycoside 3'-phosphotransferase AphA1 (88406..87591)
tnpA (88557..89261)
tnpA transposase (88557..89261)
putative short chain dehydrogenase (89492..90355)
hypothetical protein (90393..90638)
sul3 (91107..91898)
sul3 dihydropteroate synthase (91107..91898)
tnpA (92145..92831)
tnpA transposase (92145..92831)
qacI (93410..93078)
qacI quaternary ammonium compound efflux QacI (93410..93078)
aadA1a (94371..93580)
aadA1a aminoglycoside 3''-O-adenyltransferase AadA1a (94371..93580)
cmlA1 (95723..94464)
cmlA1 chloramphenicol exporter CmlA1 (95723..94464)
aadA2 (96764..95985)
aadA2 aminoglycoside 3''-O-adenyltransferase AadA2 (96764..95985)
psp (97442..96834)
psp putative phosophoserine phosphatase (97442..96834)
estX (98380..97538)
estX putative esterase (98380..97538)
intI1 (98547..99560)
intI1 class 1 integrase (98547..99560)
tnpM (99763..100113)
tnpM TnpM (99763..100113)
tnpR (100239..100799)
tnpR Tn21 TnpR (100239..100799)
tnpA (100802..103753)
tnpA transposase (100802..103753)
tnpA (104952..104248)
tnpA transposase (104952..104248)
virD2 (105877..106761)
virD2 VirD2 (105877..106761)
floR (106978..108192)
floR florfenicol/chloramphenicol export protein FloR (106978..108192)
lysR (108220..108525)
lysR transcriptional regulator LysR (108220..108525)
rcr2 (108637..110130)
rcr2 rolling circle replicase Rcr2 (108637..110130)
glmM (110608..110306)
glmM phosphoglucosamine mutase GlmM (110608..110306)
sul2 (111510..110695)
sul2 dihydropteroate synthase (111510..110695)
transposase Orf1 (111600..112169)
transposase Orf2 (112244..112690)
phenol hydroxylase, P1 oxygenase component DmpL (113372..112887)
phenol hydroxylase, assembly protein DmpK (113544..113410)
tnpA (115183..115935)
tnpA transposase (115183..115935)
aph(4)-Ia (117382..116357)
aph(4)-Ia aminoglycoside phosphotransferase Aph(4)-Ia (117382..116357)
aac(3)-IV (118387..117611)
aac(3)-IV AAC(3)-IV (118387..117611)
tnpA (118501..119205)
tnpA transposase (118501..119205)
aac(6')-lb-cr (119385..119903)
aac(6')-lb-cr AAC(6')-Ib-cr (119385..119903)
blaOXA-1 (120034..120864)
blaOXA-1 beta-lactamase OXA-1 (120034..120864)
catB3 (121002..121634)
catB3 chloramphenicol acetyltransferase CatB3 (121002..121634)
arr3 (121719..122171)
arr3 rifampin ADP-ribosyl transferase (121719..122171)
qacEdelta1 (122394..122741)
qacEdelta1 QacEdelta1 (122394..122741)
sul1 (122735..123574)
sul1 dihydropteroate synthase (122735..123574)
tnpA (124727..124023)
tnpA transposase (124727..124023)
hypothetical protein (126417..126767)
hypothetical protein (127144..127461)
hypothetical protein (127919..127512)
hypothetical protein (128410..127949)
putative inner membrane protein (128977..128747)
hypothetical protein (129301..129014)
hypothetical protein (129593..129339)
hypothetical protein (129872..129639)
hypothetical protein (130990..130094)
putative nuclease (131508..130993)
dcm (131723..133150)
dcm DNA-cytosine methyltransferase (131723..133150)
hypothetical protein (133211..133378)
hypothetical protein (133401..134720)
hypothetical protein (134733..134936)
ATP/GTP-binding protein (136205..135000)
hypothetical protein (137020..136202)
hypothetical protein (137663..138043)
hypothetical protein (138101..138766)
hypothetical protein (138826..139281)
hypothetical protein (139323..139559)
hypothetical protein (139766..139879)
h-ns (140057..140461)
h-ns DNA-binding protein H-NS (140057..140461)
hypothetical protein (140495..140716)
hypothetical protein (141006..140803)
hypothetical protein (141229..141068)
hypothetical protein (141496..141702)
hypothetical protein (142037..143023)
DNA helicase (143020..145059)
hypothetical protein (145307..145062)
hypothetical protein (145671..145372)
hypothetical protein (146840..146415)
putative DNA-binding protein (147909..147094)
hypothetical protein (148332..147922)
hypothetical protein (148640..148434)
hipA (150026..148701)
hipA HipA protein (150026..148701)
hipB (150327..150031)
hipB Transcriptional regulator HipB (150327..150031)
hypothetical protein (151320..150928)
hypothetical protein (151663..152034)
hypothetical protein (152126..152317)
hypothetical protein (152367..152648)
hypothetical protein (153120..152989)
terF (154452..153211)
terF TerF (154452..153211)
terE (155456..154881)
terE TerE (155456..154881)
terD (156102..155524)
terD TerD (156102..155524)
terC (157191..156151)
terC integral membrane protein TerC (157191..156151)
terB (157669..157214)
terB TerB (157669..157214)
terA (158717..157692)
terA TerA (158717..157692)
terZ (159430..158849)
terZ TerZ (159430..158849)
Carbamoylphosphate synthase large subunit (159754..160812)
adenine/guanine phosphoribosyltransferase (160822..161964)
hypothetical protein (161957..162730)
putative ATP/GTP-binding protein (162732..163811)
ATP synthase (163811..164767)
hypothetical protein (164778..165986)
terW (166004..166471)
terW TerW (166004..166471)
hypothetical protein (166776..166937)
terY1 (166979..167572)
terY1 putative tellurium resistance protein TerY1 (166979..167572)
terX (167595..168236)
terX tellurium resistance protein TerX (167595..168236)
terY2 (168236..168874)
terY2 putative tellurium resistance protein TerY2 (168236..168874)
terY3 (168960..170000)
terY3 putative tellurium resistance protein TerY3 (168960..170000)
hypothetical protein (170000..171637)
putative kinase protein (171609..173162)
hypothetical protein (174411..173329)
hha (174984..174772)
hha putative regulatory protein Hha (174984..174772)
putative recombinase (175155..176330)
hypothetical protein (176537..176352)
hypothetical protein (177537..176632)
putative DNA replication protein (178509..177547)
putative membrane protein (179046..178600)
hypothetical protein (179599..179063)
hypothetical protein (179930..179673)
putative membrane protein (180528..179938)
hypothetical protein (180848..180573)
hypothetical protein (182068..181112)
hypothetical protein (183178..182240)
hypothetical protein (184165..183245)
hypothetical protein (185169..184234)
hypothetical protein (186118..185240)
hypothetical protein (186718..186197)
hypothetical protein (188221..186989)
hypothetical protein (188556..188335)
hypothetical protein (190640..188628)
hypothetical protein (191845..190718)
hypothetical protein (192082..191909)
Nitric oxide reductase activation protein NorQ (193272..192214)
hypothetical protein (194307..193330)
hypothetical protein (194745..194368)
hypothetical protein (195675..194803)
hypothetical protein (195987..195832)
trhI (197854..196070)
trhI IncHI2 plasmid conjugative transfer DNA helicase TrhI (197854..196070)
putative lipoprotein (198034..198906)
trhN (202123..198935)
trhN IncHI2 plasmid conjugative transfer protein TrhN (202123..198935)
trhU (203200..202142)
trhU IncHI2 plasmid conjugative transfer pilus assembly protein TrhU (203200..202142)
trhW (204853..203342)
trhW IncHI2 plasmid conjugative transfer pilus assembly protein TrhW (204853..203342)
trhF (205352..204840)
trhF IncHI2 plasmid conjugative transfer protein TrhF (205352..204840)
putative exported protein (209934..205630)
htdK (210608..210054)
htdK IncHI2 plasmid conjugative transfer protein HtdK (210608..210054)
htdF (211042..210617)
htdF IncHI2 plasmid conjugative transfer protein HtdF (211042..210617)
htdA (211484..211032)
htdA IncHI2 plasmid conjugative transfer protein HtdA (211484..211032)
parR (212526..211888)
parR plasmid partition protein ParR (212526..211888)
parM (213575..212538)
parM plasmid partition protein ParM (213575..212538)
trhO (213939..214886)
trhO IncHI2 plasmid conjugative transfer protein TrhO (213939..214886)
putative exported protein (214883..215719)
putative lipoprotein (215712..216233)
trhZ (216230..216619)
trhZ IncHI2 plasmid conjugative transfer protein TrhZ (216230..216619)
parB (217685..216681)
parB chromosome/plasmid partitioning protein ParB (217685..216681)
parA (218935..217682)
parA chromosome/plasmid partitioning protein ParA (218935..217682)
trhC (225453..222772)
trhC IncHI2 plasmid conjugative transfer pilus assembly protein TrhC (225453..222772)
trhV (226412..225462)
trhV IncHI2 plasmid conjugative transfer protein TrhV (226412..225462)
htdT (227279..226422)
htdT IncHI2 plasmid conjugative transfer protein HtdT (227279..226422)
htdV (227775..227293)
htdV IncHI2 plasmid conjugative transfer protein HtdV (227775..227293)
trhB (229138..227783)
trhB IncHI2 plasmid conjugative transfer protein TrhB (229138..227783)
htdO (229589..229128)
htdO IncHI2 plasmid conjugative transfer protein HtdO (229589..229128)
trhK (230862..229591)
trhK IncHI2 plasmid conjugative transfer protein TrhK (230862..229591)
trhE (231650..230862)
trhE IncHI2 plasmid conjugative transfer protein TrhE (231650..230862)
trhL (232012..231662)
trhL IncHI2 plasmid conjugative transfer protein TrhL (232012..231662)
trhA (232383..232030)
trhA IncHI2 plasmid conjugative transfer protein TrhA (232383..232030)
hypothetical protein (233154..232906)
hypothetical protein (233503..233297)
repHIA (234407..233532)
repHIA putative replication protein (234407..233532)
hypothetical protein (234884..235939)
hypothetical protein (235957..236157)
hypothetical protein (236154..236870)
hypothetical protein (237108..237959)
dam (238780..237968)
dam methyl-directed repair DNA adenine methylase (238780..237968)
putative DNA-binding plasmid partition protein (239150..240313)
putative DNA restriction methylase (240561..242252)
hypothetical protein (242249..242425)
hypothetical protein (242474..242935)
putative inner membrane protein (242916..243197)
hypothetical protein (243830..243255)
transposase Orf2 (244772..243867)
transposase Orf1 (245095..244730)
hypothetical protein (245590..248046)
hypothetical protein (248828..248965)