INTEGRALL

The Integron Database

Escherichia coli
Accession Number: LT985273
Source: n.m.
Journal: Submitted (12-FEB-2018) Genoscope CEA, 2 rue Gaston Cremieux CP5706 91057 Evry cedex, France, France
Published: 15-MAR-2018
Title: Direct Submission
Authors: Cea,G.-C., William,W.
Remarks: Class 1 integron. In54
Promoter: PcH1
Gene Product Sequence
(363..293)
incRNA (363..293)
repY (378..467)
repY regulator of repZ expression (378..467)
repZ (410..1486)
repZ replication initiation protein (Replication-associated protein) (410..1486)
(3717..2509)
putative transposase (3717..2509)
(3970..3698)
conserved protein of unknown function (3970..3698)
tnpA (6461..3990)
tnpR1721 (7025..6465)
tnpR1721 transposon Tn1721 resolvase (7025..6465)
intI1 (8767..7754)
intI1 Class 1 integron Integrase (8767..7754)
dfrA17 (8925..9398)
dfrA17 Dihydrofolate reductase DfrA17 (8925..9398)
aadA5 (9529..10317)
aadA5 Streptomycin 3''-adenylyltransferase AadA5 (9529..10317)
tnpA IS26 (10519..11223)
tnpA IS26 transposase of IS26, IS6 family (10519..11223)
(11342..12031)
(12389..12213)
putative phage integrase protein (12389..12213)
sul2 (12719..13534)
sul2 Dihydropteroate synthase type-2 (12719..13534)
glmM (13621..13923)
ISCR2 (15235..14099)
yacA (15602..15871)
yacA putative plasmid stabilisation system protein YacA; putative toxin-antitoxin system; Antitoxin YacA (15602..15871)
yacB (15871..16149)
yacB putative plasmid stabilisation system protein YacB, Toxin-antitoxin system, RelE/ParE toxin family (15871..16149)
yacC (16189..17037)
yacC putative exoribonuclease YacC (16189..17037)
(17154..17627)
Conserved hypothetical protein YadA (17154..17627)
(18370..18104)
Conserved hypothetical protein YaeB (18370..18104)
(18864..18370)
conserved hypothetical protein YafA (18864..18370)
(19522..18920)
conserved hypothetical protein YafB (19522..18920)
(19701..19477)
conserved protein of unknown function (19701..19477)
(19876..21222)
conserved protein of unknown function (19876..21222)
cib (21501..23381)
cib Colicin-Ib (21501..23381)
(23865..24185)
conserved hypothetical protein, putative membrane protein (23865..24185)
ydeA (24823..24233)
ydeA conserved protein of unknown function YdeA (24823..24233)
(25080..24823)
conserved hypothetical protein (25080..24823)
(25232..25065)
conserved protein of unknown function (25232..25065)
(25431..26432)
Conserved hypothetical protein (25431..26432)
ibfA (26952..26608)
ibfA Abortive infection protein (26952..26608)
(27705..27451)
conserved protein of unknown function (27705..27451)
(28676..27750)
conserved protein of unknown function (28676..27750)
yedA (29208..29621)
yedA conserved hypothetical protein (29208..29621)
resD (29611..30402)
resD resolvase protein ResD (29611..30402)
yefA (30582..31226)
yefA ATPase involved in chromosome partitioning, ParA protein homolog (30582..31226)
(31313..31621)
conserved hypothetical protein (31313..31621)
parA (32035..33015)
parA Plasmid segregation protein ParM-like, stable plasmid inheritance protein (32035..33015)
parB (33008..33424)
parB Plasmid stability protein (33008..33424)
impB (34700..33426)
impB DNA polymerase type-Y, UV protection protein impB (34700..33426)
impA (35137..34700)
impA UV protection and mutation protein (35137..34700)
impC (35382..35134)
impC DNA damage-inducible protein DinI-like (35382..35134)
(35776..36702)
conserved hypothetical protein (35776..36702)
YfbB (37087..37770)
YfbB Site-specific DNA-methyltransferase (37087..37770)
(37771..37992)
conserved protein of unknown function (37771..37992)
(38004..38438)
conserved hypothetical protein (38004..38438)
(38438..39259)
conserved hypothetical protein (38438..39259)
(39677..40102)
Antirestriction protein (39677..40102)
(40149..40571)
conserved hypothetical protein (40149..40571)
(40568..40759)
conserved hypothetical protein (40568..40759)
ssb (41529..42056)
ssb single-stranded DNA-binding protein (41529..42056)
(42114..42347)
conserved hypothetical protein (42114..42347)
yfhA (42316..44364)
yfhA DNA-binding protein involved in plasmid partitioning (ParB-like partition protein) (42316..44364)
psiB (44419..44853)
psiB Plasmid SOS inhibition protein B (44419..44853)
psiA (44850..45569)
psiA Plasmid SOS inhibition protein A (44850..45569)
ygaA (45566..46162)
ygaA conserved protein of unknown function (45566..46162)
ardA (46625..47125)
ardA Antirestriction protein ArdA (46625..47125)
ygcA (47854..48288)
ygcA conserved protein of unknown function (47854..48288)
ygdA (48380..48646)
ygdA conserved protein of unknown function (48380..48646)
ygdB (48711..49652)
ygdB putative transposase YgdB (48711..49652)
(49714..49884)
conserved protein of unknown function, putative YdgA domain associated with transposition, inversion, or recombination (49714..49884)
ygeA (50166..49915)
ygeA conserved hypothetical protein containing putative lambda repressor-like DNA-binding domain (50166..49915)
ygfB (50746..51594)
ygfB conserved hypothetical protein (50746..51594)
yggA (52014..51679)
yggA conserved hypothetical protein (52014..51679)
nikA (52248..52580)
nikA Relaxosome component protein NikA; ribbon-helix-helix protein, CopG family (52248..52580)
nikB (52591..55290)
nikB IncI1 plasmid relaxase/mobilization protein NikB (52591..55290)
trbC (57618..55327)
trbC IncI1 plasmid conjugative transfer protein TrbC (57618..55327)
trbB (58681..57611)
trbB IncI1 plasmid conjugative transfer protein TrbB, Protein-disulfide isomerase (58681..57611)
trbA (59908..58700)
trbA IncI1 plasmid conjugative transfer protein TrbA (59908..58700)
pndC (60142..60345)
pndC post-segregational killing protein PndC; Toxin-antitoxin module (60142..60345)
pndA (60200..60352)
pndA post-segregational killing protein PndA; Toxin-antitoxin module (60200..60352)
(60675..60424)
conserved protein of unknown function (60675..60424)
(61510..61334)
conserved hypothetical protein (61510..61334)
(61902..62111)
conserved protein of unknown function (61902..62111)
excAB (62833..62183)
excAB Exclusion-determining proteins A and B (62833..62183)
traY (65144..62907)
traY Conserved membrane protein; IncI1 plasmid conjugative transfer protein TraY (65144..62907)
traX (65756..65172)
traX Conserved protein of unknown function; IncI1 conjugative transfer protein TraX (65756..65172)
traW (66987..65785)
traW Conserved protein of unknown function; IncI1 plasmid conjugative transfer protein TraW; putative Lipoprotein (66987..65785)
traV (67568..66954)
traV Conserved hypothetical protein; IncI1 plasmid conjugative transfer protein TraV (67568..66954)
traU (70612..67568)
traU IncI1 plasmid conjugative transfer protein TraU; putative major AAA+ motor ATPase (70612..67568)
traT (71502..70702)
traT Conserved protein of unknown function; IncI1 plasmid conjugative transfer protein TraT (71502..70702)
(71674..71486)
Conserved protein of unknown function; IncI1 plasmid conjugative transfer protein TraS (71674..71486)
traR (72142..71738)
traR Conserved membrane protein of unknown function; IncI1 plasmid conjugative transfer protein TraR (72142..71738)
traQ (72720..72193)
traQ conserved inner membrane protein of unknown function; IncI1 plasmid conjugative transfer protein traQ (72720..72193)
traP (73424..72720)
traP Conserved protein of unknown function; IncI1 conjugative transfer protein TraP (73424..72720)
traO (74713..73424)
traO Conserved protein of unknown function; IncI1 plasmid conjugative transfer protein TraO (74713..73424)
traN (75699..74716)
traN Conserved protein of unknown function; IncI1 plasmid conjugative transfer protein TraN (75699..74716)
traM (76402..75710)
traM Conserved protein of unknown function; IncI1 plasmid conjugative transfer protein TraM (76402..75710)
traL (76746..76399)
traL IncI1 plasmid conjugative transfer protein TraL (76746..76399)
sogLS (80531..76764)
sogLS SogL DNA primase (80531..76764)
(81171..80620)
putative EDTA-resistant nuclease (Nuc) (81171..80620)
traK (81476..81186)
traK Conserved protein of unknown function; IncI1 plasmid conjugative transfer protein TraK (81476..81186)
traJ (82621..81473)
traJ IncI1 plasmid conjugative transfer protein TraJ, putative ATPase (82621..81473)
traI (83436..82618)
traI conserved hypothetical protein, IncI1 plasmid conjugative transfer protein TraI, putative Lipoprotein (83436..82618)
traH (83891..83433)
traH IncI1 plasmid conjugative transfer protein TraH, putative lipoprotein (83891..83433)
traG (84870..84286)
traG IncI1 plasmid conjugative protein TraG predicted phosphatase (84870..84286)
traF (86132..84930)
traF conserved hypothetical protein, IncI1 plasmid conjugative transfer protein TraF (86132..84930)
traE (87041..86217)
traE Conserved protein of unknown function; IncI1 plasmid conjugative transfer protein TraE (87041..86217)
rci (88346..87192)
rci Shufflon-specific DNA recombinase (88346..87192)
pilVC (88345..88662)
pilVC pilVC C-terminal (modular protein) (88345..88662)
pilVC' (88889..88659)
(88899..88952)
tnpA (89140..90402)
tnpA ISEcp1B transposase (89140..90402)
blaCTX-M-1 (90690..91565)
blaCTX-M-1 Beta-lactamase CTX-M-1 (90690..91565)
orf477 (91944..91612)
orf477 ORF477, cupin fold metalloprotein, WbuC family (91944..91612)
pilVB (91959..92165)
pilVB' (92430..92167)
pilVA' (92441..92662)
pilVA (94095..92659)
pilVA PilVA protein type IV preadhesin (modular protein with variable C-terminal (94095..92659)
pilU (94739..94083)
pilU Prepilin peptidase PilU, peptidase A24 family protein (94739..94083)
pilT (95284..94724)
pilT Lytic transglycosylase PilT (95284..94724)
pilS (95908..95294)
pilS Type IV prepilin PilS (95908..95294)
PilR (97023..95926)
PilR IncI1 conjugative transfer protein PilR Type IV pilus biogenesis protein (97023..95926)
pilQ (98589..97036)
pilQ IncI1 conjugative transfer ATPase PilQ (98589..97036)
pilP (99052..98600)
pilP IncI1 conjugal transfer pilus assembly protein PilP (99052..98600)
pilO (100334..99039)
pilO IncI1 conjugal transfer pilus assembly protein PilO Type IV pilus biogenesis protein (100334..99039)
pilN (102009..100327)
pilN IncI1 conjugative transfer protein PilN Type IV pilus outer membrane secretin (102009..100327)
pilM (102460..102023)
pilM IncI1 conjugal transfer protein PilM type IV pilus biogenenesis (102460..102023)
pilL (103527..102460)
pilL IncI1 plasmid conjugative transfer Lipoprotein PilL (103527..102460)
pilK (104154..103561)
pilK PilK protein (104154..103561)
(104447..104151)
putative protein of unknown function pilJ (104447..104151)
(104877..104623)
putative protein of unknown function pilI (104877..104623)
(105590..105039)
Conserved protein of unknown function IncI1 conjugative transfer protein TraD (105590..105039)
traC (106446..105763)
traC IncI1 plasmid conjugative transfer protein TraC (106446..105763)
traB (107254..106700)
traB IncI1 plasmid conjugative transfer NusG putative transcription antiterminator TraB (107254..106700)
(107962..107675)
Putative IncI1 conjugal transfer protein TraA putative response regulator (107962..107675)