INTEGRALL

The Integron Database

Escherichia coli
Accession Number: AJ561197
Source: clinical isolate - Norway
Journal: Unpublished
Published: 13-MAY-2004
Title: Incidence and characterization of integrons in blood culture and clinical gastrointestinal Escherichia coli in Norway and description of a novel integron containing linF, a putative lincosamide nucleotidyltransferase encoding gene cassette
Authors: Heir,E., Lindstedt,B.A., Leegaard,T.M., Gjernes,E., Kapperud,G.
Remarks:
Gene:
atgcttcagcagaaaatgatcgaacgcttcaaggaagcttgccatgaggatgcacgaataatcgcggcgctgatgttcggctcatttgctatcggagagggtgacgagttctctgatatc
gaatttgcagtgttcatccagaataatcattttgaaaatttcgatcagcgctcgtggcttaatgctgtaagtccggttgcagcttactttccggatgacttcggccaccacaccgcgctt
tttgaaaacggcattcgcggtgaattccatttcatgcgaaaatcggacataccggtcatttccacttggcaaggctacgggtggtttccctcgcttgaggaggctgttttgttggaccga
tcaggagagttgtcaaggtacgcgagtgctctcgtgggcagtcccccgaaacgtgaaggcgcgccgctggtggaaggacttgtattgaacctcatcagcctgatgctctttggggcaaat
cttttaaatcggggagagtatgctcgcgcctgggctttgctcagcaaagcacatgaaaacttactcaagttggttcgcctccatgaaggggcaacagaccactggccgacaccttcacgc
gcgctcgaaaaggatgtctcggaggactcgtataatcgctacctggcatgcacaggcagcgcggaaccaaaagcactatgtgtagcctatcatgaaacgtggaagtggagtctcgaattg
ttcaggagtgtggctggacctctgaatatcgagcttccgagaattgtaattgcgcagacaaaaaggttgctaaatgaatctgcgacgccgcacaacaagtaa
Protein:
MLQQKMIERFKEACHEDARIIAALMFGSFAIGEGDEFSDIEFAVFIQNNHFENFDQRSWLNAVSPVAAYFPDDFGHHTALFENGIRGEFHFMRKSDIPVISTWQGYGWFPSLEEAVLLDR
SGELSRYASALVGSPPKREGAPLVEGLVLNLISLMLFGANLLNRGEYARAWALLSKAHENLLKLVRLHEGATDHWPTPSRALEKDVSEDSYNRYLACTGSAEPKALCVAYHETWKWSLEL
FRSVAGPLNIELPRIVIAQTKRLLNESATPHNK