INTEGRALL

The Integron Database

Escherichia coli
Accession Number: CP025626
Source: China: Sichuan: Zigong
Journal: Unpublished
Published: 10-JAN-2018
Title: The complete genome of Escherichia coli strain SCEC020007
Authors: Liu,L., Feng,Y., Zong,Z.
Remarks: Class 1 integrons. In54, In27, In54
Promoter: PcWTGN-10 x 3
Gene Product Sequence
(144159..144225)
positive regulator of RepFIC repA1 expression (144159..144225)
repA (144214..144225)
repA incFII family plasmid replication initiator RepA (144214..144225)
(1221..1607)
hypothetical protein (1221..1607)
(1797..2450)
CPBP family intramembrane metalloprotease (1797..2450)
(2670..3134)
mRNA interferase PemK (2670..3134)
(3131..3235)
hypothetical protein (3131..3235)
(6168..3271)
Tn3-like element Tn5403 family transposase (6168..3271)
(6263..6868)
DNA resolvase (6263..6868)
(7641..6892)
Tn3 family transposase (7641..6892)
(7645..8037)
cysteine hydrolase (7645..8037)
(8175..9059)
EamA family transporter (8175..9059)
(10290..9091)
tetracycline efflux MFS transporter Tet(A) (10290..9091)
(10369..11046)
TetR family transcriptional regulator (10369..11046)
(11320..11078)
relaxase (11320..11078)
(12876..11362)
Tn3-like element TnAs1 family transposase (12876..11362)
(12942..13646)
IS6 family transposase IS15DIV (12942..13646)
(14567..13680)
integron integrase (14567..13680)
dfrA (14725..15198)
dfrA trimethoprim-resistant dihydrofolate reductase DfrA17 (14725..15198)
(15329..16117)
ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5 (15329..16117)
qacE (16323..16670)
qacE quaternary ammonium compound efflux SMR transporter QacE delta 1 (16323..16670)
(16664..17503)
sulfonamide-resistant dihydropteroate synthase Sul1 (16664..17503)
(17908..19449)
IS91 family transposase (17908..19449)
(19683..19757)
divalent-cation tolerance protein CutA (19683..19757)
(19762..20793)
twin-arginine translocation (TAT) pathway signal sequence domain protein (19762..20793)
(21442..20804)
phosphoribosylanthranilate isomerase (21442..20804)
ble (21812..21447)
ble bleomycin binding protein Ble-MBL (21812..21447)
(22628..21816)
subclass B1 metallo-beta-lactamase NDM-5 (22628..21816)
(23022..22729)
IS30 family transposase (23022..22729)
(23187..23891)
IS6 family transposase IS15DIV (23187..23891)
(24536..23943)
transcriptional regulator (24536..23943)
(25452..24694)
integrase (25452..24694)
(25532..25449)
PapC protein (25532..25449)
(25498..26771)
IS3 family transposase (25498..25858)
(26792..27325)
hypothetical protein (26792..27325)
(27930..27793)
single-stranded DNA-binding protein (27930..27793)
(28401..28075)
hypothetical protein (28401..28075)
ltrA (28987..30654)
ltrA group II intron reverse transcriptase/maturase (28987..30654)
(31158..30967)
hypothetical protein (31158..30967)
(31577..31155)
DUF1380 domain-containing protein (31577..31155)
(32049..31624)
antirestriction protein (32049..31624)
(32488..32015)
DUF1472 domain-containing protein (32488..32015)
(33233..32463)
hypothetical protein (33233..32463)
(33712..33278)
DUF1380 domain-containing protein (33712..33278)
(33947..33726)
hypothetical protein (33947..33726)
(34631..33948)
DNA methylase (34631..33948)
(35012..34708)
hypothetical protein (35012..34708)
(35918..35016)
DUF1281 domain-containing protein (35918..35016)
(36228..35956)
hypothetical protein (36228..35956)
(37627..36656)
protein SopB (37627..36656)
(38793..37627)
protein SopA (38793..37627)
(40136..39381)
replication initiation protein (40136..39381)
(41664..40858)
phage integrase family protein (41664..40858)
(41970..41665)
toxin CcdB (41970..41665)
(42190..41972)
antitoxin CcdA (42190..41972)
(42192..42470)
hypothetical protein (42192..42470)
(42750..42980)
AbrB/MazE/SpoVT family DNA-binding domain-containing protein (42750..42980)
(42977..43393)
PIN domain-containing protein (42977..43393)
(43468..45033)
ATP-dependent endonuclease (43468..45033)
(45018..46040)
DNA helicase UvrD (45018..46040)
(46165..46359)
hypothetical protein (46165..46359)
(46991..46294)
IS1-like element IS1A family transposase (46991..46294)
(47049..46948)
glycosyltransferase (47049..46948)
(47838..47141)
IS1 family transposase (47838..47141)
(47893..47795)
glycosyltransferase (47893..47795)
(48054..47893)
lipopolysaccharide core heptose(II) kinase RfaY (48054..47893)
(48279..48097)
hypothetical protein (48279..48097)
(48232..48459)
bifunctional protein-disulfide isomerase/oxidoreductase DsbC (48232..48459)
(48449..48955)
thioredoxin TrxC (48449..48955)
(49138..49953)
NADH:ubiquinone reductase (Na(+)-transporting) subunit C (49138..49953)
(50112..50297)
hypothetical protein (50112..50297)
(50240..52186)
iron permease (50240..52186)
(52227..52754)
iron transporter (52227..52754)
(52858..54237)
DUF2318 domain-containing protein (52858..54237)
(54240..55523)
ABC transporter permease (54240..55523)
(55483..56643)
ABC transporter permease (55483..56643)
(56648..57343)
ABC transporter ATP-binding protein (56648..57343)
(57261..57815)
TlpA family protein disulfide reductase (57261..57815)
(57840..58325)
hypothetical protein (57840..58325)
(58447..59190)
histidine-type phosphatase (58447..59190)
(59333..59229)
IS5/IS1182 family transposase (59333..59229)
(61781..59367)
Tn3 family transposase (61781..59367)
(61839..62543)
IS6 family transposase IS15DIV (61839..62543)
(62668..62489)
hypothetical protein (62668..62489)
(63108..62596)
DUF3330 domain-containing protein (63108..62596)
(64060..63047)
class 1 integron integrase IntI1 (64060..63047)
(64205..64702)
trimethoprim-resistant dihydrofolate reductase DfrA12 (64205..64702)
(65110..65901)
ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2 (65110..65901)
qacE (66065..66412)
qacE quaternary ammonium compound efflux SMR transporter QacE delta 1 (66065..66412)
(66406..67245)
sulfonamide-resistant dihydropteroate synthase Sul1 (66406..67245)
(67354..67175)
hypothetical protein (67354..67175)
(67373..67576)
hypothetical protein (67373..67576)
(67732..68937)
chromate transporter (67732..68937)
(68948..69253)
PadR family transcriptional regulator (68948..69253)
(69451..69269)
resolvase (69451..69269)
(69480..70244)
IS6 family transposase IS6100 (69480..70244)
(70305..70216)
type VII secretion-associated protein (70305..70216)
(70791..70435)
hypothetical protein (70791..70435)
(71321..70737)
TetR/AcrR family transcriptional regulator (71321..70737)
(72559..71321)
MFS transporter (72559..71321)
mph(A) (73461..72556)
mph(A) Mph(A) family macrolide 2'-phosphotransferase (73461..72556)
(73524..73637)
adenine-specific DNA-methyltransferase (73524..73637)
(74287..73583)
IS6 family transposase IS15DIV (74287..73583)
(74452..74745)
IS30 family transposase (74452..74745)
(74846..75658)
subclass B1 metallo-beta-lactamase NDM-5 (74846..75658)
ble (75662..76027)
ble bleomycin binding protein Ble-MBL (75662..76027)
(76032..76670)
phosphoribosylanthranilate isomerase (76032..76670)
(77712..76681)
twin-arginine translocation (TAT) pathway signal sequence domain protein (77712..76681)
(77791..77717)
divalent-cation tolerance protein CutA (77791..77717)
(79566..78025)
IS91 family transposase (79566..78025)
(80810..79971)
sulfonamide-resistant dihydropteroate synthase Sul1 (80810..79971)
qacE (81151..80804)
qacE quaternary ammonium compound efflux SMR transporter QacE delta 1 (81151..80804)
(82145..81357)
ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5 (82145..81357)
dfrA (82749..82276)
dfrA trimethoprim-resistant dihydrofolate reductase DfrA17 (82749..82276)
(82907..83794)
integron integrase (82907..83794)
(84532..83828)
IS6 family transposase IS15DIV (84532..83828)
(87050..84597)
DUF4158 domain-containing protein (87050..84597)
(87214..87771)
recombinase (87214..87771)
blaTEM (87954..88814)
blaTEM class A broad-spectrum beta-lactamase TEM-1 (87954..88814)
(88984..89739)
16S rRNA (guanine(1405)-N(7))-methyltransferase RmtB1 (88984..89739)
(90368..89820)
potassium/proton antiporter (90368..89820)
(90389..90781)
molecular chaperone GroEL (90389..90781)
(91679..90975)
IS6 family transposase IS15DIV (91679..90975)
(91670..91747)
invertase (91670..91747)
(91747..92952)
alpha-galactosidase (91747..92952)
lacY (93015..94292)
lacY MFS transporter (93015..94292)
(94292..95722)
glycosyl hydrolase family 32 (94292..95722)
(95917..97311)
porin (95917..97311)
(97311..97490)
hypothetical protein (97311..97490)
(97661..97557)
thiosulfate reductase cytochrome B subunit (97661..97557)
(97663..97761)
glycosyltransferase (97663..97761)
(97718..98415)
IS1 family transposase (97718..98415)
(98431..99054)
ion transporter (98431..99054)
(99139..99390)
L-threonine dehydrogenase (99139..99390)
(99996..99679)
IS110 family transposase (99996..99679)
(100151..100256)
plasmid SOS inhibition protein A (100151..100256)
(101811..100442)
IS3-like element IS150 family transposase (101811..101331)
(101934..102092)
stable plasmid inheritance protein (101934..102092)
(102927..102330)
hypothetical protein (102927..102330)
(102991..103278)
hypothetical protein (102991..103278)
(103322..104218)
DUF945 domain-containing protein (103322..104218)
(105116..104514)
lytic transglycosylase (105116..104514)
(105456..105839)
conjugal transfer protein TraM (105456..105839)
(106030..106677)
conjugal transfer protein TraJ (106030..106677)
(106813..107028)
TraY domain-containing protein (106813..107028)
traA (107071..107436)
traA pilin (107071..107436)
traL (107451..107762)
traL type IV conjugative transfer system protein TraL (107451..107762)
traE (107784..108350)
traE type IV conjugative transfer system protein TraE (107784..108350)
traK (108337..109065)
traK type-F conjugative transfer system secretin TraK (108337..109065)
(109065..110492)
conjugal transfer protein TraB (109065..110492)
(110482..111072)
conjugal transfer protein TraP (110482..111072)
(111218..111379)
conjugal transfer protein TrbD (111218..111379)
(111372..111623)
protein TrbG (111372..111623)
traV (111620..112135)
traV type IV conjugative transfer system protein TraV (111620..112135)
(112270..112491)
protein TraR (112270..112491)
traC (112651..115278)
traC type IV secretion system protein TraC (112651..115278)
trbI (115275..115661)
trbI type-F conjugative transfer system protein TrbI (115275..115661)
traW (115658..116290)
traW protein TraW (115658..116290)
(116287..117279)
conjugal transfer protein TraU (116287..117279)
trbC (117288..117926)
trbC type-F conjugative transfer system pilin assembly protein TrbC (117288..117926)
traN (117923..119731)
traN type-F conjugative transfer system mating-pair stabilization protein TraN (117923..119731)
(119755..120015)
conjugal transfer protein TrbE (119755..120015)
traF (119978..120751)
traF type-F conjugative transfer system pilin assembly protein TraF (119978..120751)
(120767..121114)
conjugal transfer protein TrbA (120767..121114)
traQ (121233..121517)
traQ type-F conjugative transfer system pilin chaperone TraQ (121233..121517)
trbB (121504..122049)
trbB type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB (121504..122049)
(121979..122341)
conjugal transfer protein TrbJ (121979..122341)
(122341..123714)
conjugal transfer protein TraH (122341..123714)
(123711..126530)
conjugal transfer protein TraG (123711..126530)
(126549..127046)
entry exclusion protein (126549..127046)
(127075..127809)
complement resistance protein TraT (127075..127809)
traD (128062..130296)
traD type IV conjugative transfer system coupling protein TraD (128062..130296)
(130703..130305)
tRNA(fMet)-specific endonuclease VapC (130703..130305)
(130933..130703)
antitoxin (130933..130703)
(131012..136282)
conjugative transfer relaxase/helicase TraI (131012..136282)
(136245..136364)
conjugal transfer protein (136245..136364)
(136558..138099)
IS21 family transposase (136558..138099)
(138114..138860)
ATP-binding protein (138114..138860)
traX (138888..139634)
traX type-F conjugative transfer system pilin acetylase TraX (138888..139634)
(139689..140249)
RNA chaperone ProQ (139689..140249)
(140380..140589)
hypothetical protein (140380..140589)
(141001..141627)
hypothetical protein (141001..141627)
(141779..142348)
DUF2726 domain-containing protein (141779..142348)
(142524..142830)
hypothetical protein (142524..142830)
(143177..142935)
hypothetical protein (143177..142935)
(143233..143382)
type I toxin-antitoxin system hok family toxin (143233..143382)
(143666..143923)
transcriptional regulator (143666..143923)
(144075..143959)
replication protein RepA (144075..143959)