INTEGRALL

The Integron Database

Escherichia coli
Accession Number: CP029575
Source: feces - Sweden
Journal: Unpublished
Published: 31-MAY-2018
Title: High prevalence of unstable heteroresistance caused by gene amplification in clinical bacterial isolates
Authors: Nicoloff,H., Hjort,K., Andersson,D.I.
Remarks: Class 1 integrons. In54, In54
Promoter: PcH1, PcH1
Gene Product Sequence
(14..127)
adenine-specific DNA-methyltransferase (14..127)
(777..73)
IS6 family transposase IS15DIV (777..73)
(912..1007)
23S rRNA methyltransferase attenuator leader peptide ErmL (912..1007)
(1133..1870)
23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) (1133..1870)
(1875..1985)
hypothetical protein (1875..1985)
(2500..2949)
hypothetical protein (2500..2949)
(3102..3251)
chaperonin GroEL (3102..3251)
(3478..5010)
IS91 family transposase (3478..5010)
(5254..5102)
LysR family transcriptional regulator (5254..5102)
(5265..5387)
integrase (5265..5387)
(6037..5333)
IS6 family transposase IS15DIV (6037..5333)
(8345..6102)
Tn3 family transposase (8345..6102)
(8359..8691)
cupin fold metalloprotein, WbuC family (8359..8691)
blaCTX-M (9613..8738)
blaCTX-M class A extended-spectrum beta-lactamase CTX-M-15 (9613..8738)
(11131..9869)
IS1380 family transposase ISEc9 (11131..9869)
(12126..11243)
IS4 family transposase (12126..11243)
(12233..12066)
lipopolysaccharide core heptose(II) kinase RfaY (12233..12066)
aac(3) (12269..13129)
aac(3) aminoglycoside N-acetyltransferase AAC(3)-IId (12269..13129)
(13142..13684)
tunicamycin resistance protein (13142..13684)
(14357..14166)
hypothetical protein (14357..14166)
(14363..14608)
hypothetical protein (14363..14608)
(14659..15786)
DUF3883 domain-containing protein (14659..15786)
(15823..16527)
IS6 family transposase IS15DIV (15823..16527)
(16586..16473)
adenine-specific DNA-methyltransferase (16586..16473)
mph(A) (16649..17554)
mph(A) Mph(A) family macrolide 2'-phosphotransferase (16649..17554)
(17551..18789)
MFS transporter (17551..18789)
(18789..19373)
TetR/AcrR family transcriptional regulator (18789..19373)
(19319..19675)
hypothetical protein (19319..19675)
(19805..19894)
type VII secretion-associated protein (19805..19894)
(20630..19866)
IS6 family transposase IS6100 (20630..19866)
(20659..20841)
resolvase (20659..20841)
(21162..20857)
PadR family transcriptional regulator (21162..20857)
(22378..21173)
chromate transporter (22378..21173)
(22737..22534)
hypothetical protein (22737..22534)
(22756..22935)
hypothetical protein (22756..22935)
(23704..22865)
sulfonamide-resistant dihydropteroate synthase Sul1 (23704..22865)
qacE (24045..23698)
qacE quaternary ammonium compound efflux SMR transporter QacE delta 1 (24045..23698)
aadA (25039..24251)
aadA ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5 (25039..24251)
dfrA (25643..25170)
dfrA trimethoprim-resistant dihydrofolate reductase DfrA17 (25643..25170)
(25801..26407)
DNA integrase IntI1 (25801..26407)
(27002..26298)
IS6 family transposase IS15DI (27002..26298)
(27202..27942)
site-specific recombinase (27202..27942)
(29204..28227)
repFIB replication protein A (29204..28227)
(29909..29613)
hypothetical protein (29909..29613)
(29950..30273)
helix-turn-helix domain-containing protein (29950..30273)
(30275..30379)
AAA family ATPase (30275..30379)
(30440..30953)
protein ImpB (30440..30953)
(31831..31134)
IS1 family transposase (31831..31134)
(31916..31788)
glycosyltransferase (31916..31788)
(32667..31888)
ATP-dependent endonuclease (32667..31888)
(33158..32742)
PIN domain-containing protein (33158..32742)
(33385..33155)
AbrB/MazE/SpoVT family DNA-binding domain-containing protein (33385..33155)
(33943..33665)
hypothetical protein (33943..33665)
(33945..34163)
antitoxin CcdA (33945..34163)
(34165..34470)
toxin CcdB (34165..34470)
(34471..35277)
phage integrase family protein (34471..35277)
(35999..36754)
replication initiation protein (35999..36754)
(37342..38508)
protein SopA (37342..38508)
(38508..39479)
protein SopB (38508..39479)
(39907..40179)
hypothetical protein (39907..40179)
(40217..41119)
DUF1281 domain-containing protein (40217..41119)
(41123..41427)
hypothetical protein (41123..41427)
(41504..42187)
DNA methylase (41504..42187)
(42188..42409)
hypothetical protein (42188..42409)
(42423..42857)
DUF1380 domain-containing protein (42423..42857)
(42902..43229)
hypothetical protein (42902..43229)
(43545..44113)
DUF1472 domain-containing protein (43545..44113)
(44086..44511)
antirestriction protein (44086..44511)
(44558..44980)
DUF1380 domain-containing protein (44558..44980)
(44977..45168)
hypothetical protein (44977..45168)
(45688..45440)
hypothetical protein (45688..45440)
(45942..45685)
hypothetical protein (45942..45685)
(46200..46430)
hypothetical protein (46200..46430)
(46482..47843)
DUF3560 domain-containing protein (46482..47843)
(47891..48456)
class I SAM-dependent methyltransferase (47891..48456)
(48482..48694)
hypothetical protein (48482..48694)
(48607..48864)
hypothetical protein (48607..48864)
(48870..49102)
hypothetical protein (48870..49102)
(49104..49310)
single-stranded DNA-binding protein (49104..49310)
(49297..49374)
single-stranded DNA-binding protein (49297..49374)
ltrA (49988..51889)
ltrA group II intron reverse transcriptase/maturase (49988..51889)
(52035..52739)
IS6 family transposase IS15DI (52035..52739)
(52972..52685)
hypothetical protein (52972..52685)
(53339..54508)
hypothetical protein (53339..54508)
(54909..54734)
IS3 family transposase (54909..54734)
(55627..55355)
transcriptional regulator (55627..55355)
(56633..56149)
IS3 family transposase (56633..56149)
(56870..58840)
TonB-dependent hemoglobin/transferrin/lactoferrin family receptor (56870..58840)
(58847..59638)
DUF4198 domain-containing protein (58847..59638)
(60309..59701)
IS66 family transposase (60309..59701)
(61159..60377)
transposase (61159..60377)
(62178..61156)
IS21-like element IS100 family transposase (62178..61156)
(62276..62205)
restriction endonuclease (62276..62205)
(63209..62264)
IS66 family transposase (63209..62264)
(63632..63258)
IS66 family insertion sequence hypothetical protein (63632..63258)
(63657..64361)
IS6 family transposase IS15DIV (63657..64361)
(64496..64600)
IS5/IS1182 family transposase (64496..64600)
(65382..64639)
histidine-type phosphatase (65382..64639)
(65989..65504)
hypothetical protein (65989..65504)
(66568..66014)
TlpA family protein disulfide reductase (66568..66014)
(67181..66486)
ABC transporter ATP-binding protein (67181..66486)
(68346..67186)
ABC transporter permease (68346..67186)
(69589..68306)
ABC transporter permease (69589..68306)
(70971..69592)
DUF2318 domain-containing protein (70971..69592)
(71602..71075)
iron transporter (71602..71075)
(73589..71643)
iron permease (73589..71643)
(73717..73532)
hypothetical protein (73717..73532)
(74691..73876)
NADH:ubiquinone reductase (Na(+)-transporting) subunit C (74691..73876)
(75380..74874)
protein disulfide oxidoreductase (75380..74874)
(75597..75370)
scsC protein (75597..75370)
(75775..75936)
lipopolysaccharide core heptose(II) kinase RfaY (75775..75936)
(75936..76034)
glycosyltransferase (75936..76034)
(75991..76511)
IS1 family transposase (75991..76511)
(76573..77277)
IS6 family transposase IS15DI (76573..77277)
(77357..77223)
integrase (77357..77223)
(77405..77902)
single-stranded DNA-binding protein (77405..77902)
(77970..78203)
DUF905 domain-containing protein (77970..78203)
(78231..78428)
hypothetical protein (78231..78428)
psiB (78483..78917)
psiB conjugation system SOS inhibitor PsiB (78483..78917)
(78914..79633)
plasmid SOS inhibition protein A (78914..79633)
(79890..81259)
IS3-like element IS150 family transposase (79890..80370)
(81359..81517)
protein hok (81359..81517)
(81737..81967)
hypothetical protein (81737..81967)
(82374..82138)
hypothetical protein (82374..82138)
(82438..82725)
hypothetical protein (82438..82725)
(82735..83664)
DUF945 domain-containing protein (82735..83664)
(84563..83961)
lytic transglycosylase (84563..83961)
(84884..85267)
conjugal transfer protein TraM (84884..85267)
(85454..86143)
protein TraJ (85454..86143)
(86242..86637)
relaxosome protein TraY (86242..86637)
traA (86670..87035)
traA pilin (86670..87035)
traL (87050..87361)
traL type IV conjugative transfer system protein TraL (87050..87361)
traE (87383..87949)
traE protein TraE (87383..87949)
traK (87993..88664)
traK type-F conjugative transfer system secretin TraK (87993..88664)
(88664..90091)
protein TraB (88664..90091)
(90081..90671)
conjugal transfer protein TraP (90081..90671)
(90625..90855)
DUF2689 domain-containing protein (90625..90855)
(90867..91118)
protein TrbG (90867..91118)
traV (91115..91630)
traV type IV conjugative transfer system protein TraV (91115..91630)
(91765..91986)
protein TraR (91765..91986)
traC (92146..94773)
traC conjugal transfer protein TraC (92146..94773)
trbI (94770..95156)
trbI type-F conjugative transfer system protein TrbI (94770..95156)
traW (95153..95785)
traW protein TraW (95153..95785)
(95782..96774)
conjugal transfer protein TraU (95782..96774)
trbC (96783..97421)
trbC type-F conjugative transfer system pilin assembly protein TrbC (96783..97421)
(97418..99225)
type-F conjugative transfer system mating-pair stabilization protein TraN (97418..99225)
(99249..99509)
conjugal transfer protein TrbE (99249..99509)
traF (99472..100245)
traF type-F conjugative transfer system pilin assembly protein TraF (99472..100245)
(100259..100600)
conjugal transfer protein TrbA (100259..100600)
(100916..100581)
toxin ArtA (100916..100581)
traQ (100997..101281)
traQ type-F conjugative transfer system pilin chaperone TraQ (100997..101281)
trbB (101268..101822)
trbB type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB (101268..101822)
(101719..102126)
conjugal transfer protein TrbJ (101719..102126)
(102080..102472)
conjugal transfer protein TrbF (102080..102472)
(102456..103832)
conjugal transfer protein TraH (102456..103832)
(103829..106654)
conjugal transfer protein TraG (103829..106654)
(106651..107160)
conjugal transfer protein TraS (106651..107160)
(107174..107905)
complement resistance protein TraT (107174..107905)
traD (108157..110355)
traD type IV conjugative transfer system coupling protein TraD (108157..110355)
(110355..115475)
conjugative transfer relaxase/helicase TraI (110355..115475)
traX (115495..116241)
traX type-F conjugative transfer system pilin acetylase TraX (115495..116241)
(116296..116856)
conjugal transfer protein (116296..116856)
(116990..117202)
hypothetical protein (116990..117202)
(117373..117488)
endonuclease (117373..117488)
(117685..117503)
hypothetical protein (117685..117503)
(117647..118324)
IS66 family insertion sequence hypothetical protein (117647..118324)
(118324..118671)
IS66 family insertion sequence hypothetical protein (118324..118671)
(118691..120262)
IS66 family transposase (118691..120262)
(120916..120183)
IS1 family transposase (120916..120183)
(120971..120873)
glycosyltransferase (120971..120873)
(120966..121199)
hypothetical protein (120966..121199)
(121387..121145)
hypothetical protein (121387..121145)
(121443..121592)
Hok/Gef family protein (121443..121592)
(121876..122133)
transcriptional regulator (121876..122133)
(122285..122169)
replication protein RepA (122285..122169)
(122369..122443)
RepA leader peptide Tap (122369..122443)
(122436..122882)
incFII family plasmid replication initiator RepA (122436..122882)
(123310..122828)
hypothetical protein (123310..122828)
arcA (124203..125423)
arcA arginine deiminase (124203..125423)
arcC (125434..126345)
arcC carbamate kinase (125434..126345)
argF (126430..127434)
argF ornithine carbamoyltransferase (126430..127434)
(127482..128885)
YfcC family protein (127482..128885)
(128966..129445)
ArgR family transcriptional regulator (128966..129445)
(129850..129509)
IS66 family transposase (129850..129509)
(130023..129802)
hypothetical protein (130023..129802)
(130404..130054)
IS66 family insertion sequence hypothetical protein (130404..130054)
(130763..130401)
IS66 family insertion sequence hypothetical protein (130763..130401)
(131569..130872)
IS1 family transposase (131569..130872)
(131624..131526)
glycosyltransferase (131624..131526)
(131602..132180)
DUF2726 domain-containing protein (131602..132180)
(132946..132593)
hypothetical protein (132946..132593)
(134440..133418)
IS110 family transposase (134440..133418)
(134878..134627)
hypothetical protein (134878..134627)
(134845..135102)
replication protein RepA (134845..135102)
(135253..135143)
replication protein RepA (135253..135143)
(135337..135411)
positive regulator of RepFIC repA1 expression (135337..135411)
repA (135404..136261)
repA incFII family plasmid replication initiator RepA (135404..136261)
(136624..137010)
hypothetical protein (136624..137010)
(137200..137853)
CPBP family intramembrane metalloprotease (137200..137853)
(138073..138537)
mRNA interferase PemK (138073..138537)
(138534..138638)
hypothetical protein (138534..138638)
(141571..138674)
Tn3-like element Tn5403 family transposase (141571..138674)
(141666..142271)
DNA resolvase (141666..142271)
(142807..142304)
hypothetical protein (142807..142304)
(142873..143577)
IS6 family transposase IS15DIV (142873..143577)
(143721..144275)
fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5 (143721..144275)
(144406..145236)
oxacillin-hydrolyzing class D beta-lactamase OXA-1 (144406..145236)
(145374..145814)
chloramphenicol acetyltransferase CAT (145374..145814)
(146572..145868)
IS6 family transposase IS15DIV (146572..145868)
(147317..146637)
integrase/recombinase (147317..146637)
dfrA (147475..147948)
dfrA trimethoprim-resistant dihydrofolate reductase DfrA17 (147475..147948)
aadA (148079..148867)
aadA ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5 (148079..148867)
qacE (149073..149420)
qacE quaternary ammonium compound efflux SMR transporter QacE delta 1 (149073..149420)
(149414..150253)
sulfonamide-resistant dihydropteroate synthase Sul1 (149414..150253)
(150362..150183)
hypothetical protein (150362..150183)
(150381..150584)
hypothetical protein (150381..150584)
(150740..151945)
chromate transporter (150740..151945)
(151956..152261)
PadR family transcriptional regulator (151956..152261)
(152459..152277)
resolvase (152459..152277)
(152488..153252)
IS6 family transposase IS6100 (152488..153252)
(153313..153224)
type VII secretion-associated protein (153313..153224)
(153799..153443)
hypothetical protein (153799..153443)
(154329..153745)
TetR/AcrR family transcriptional regulator (154329..153745)
(155567..154329)
MFS transporter (155567..154329)
mph(A) (156469..155564)
mph(A) Mph(A) family macrolide 2'-phosphotransferase (156469..155564)