INTEGRALL

The Integron Database

Klebsiella pneumoniae subsp. pneumoniae
Accession Number: CP030859
Source: nasal swab from a 10 day old extremely preterm born neonate suffering from respiratory distress - India: West Bengal
Journal: Unpublished
Published: 09-AUG-2018
Title: Resistome mapping of two carbapenam-hydrolyzing multidrug resistant Klebsiella pneumoniae strains isolated from nasal swabs of preterm neonates
Authors: Bhattacharjee,B., Bardhan,T., Chakraborty,M., Basu,M.
Remarks: Class 1 integrons. Not numbered, Not numbered
Promoter: PcWTGN-10, PcWTGN-10
Gene Product Sequence
(8635..8753)
integrase (8635..8753)
(9592..9066)
IS110 family transposase (9592..9066)
(9949..9765)
IS110 family transposase (9949..9765)
merR (10488..10068)
merR Hg(II)-responsive transcriptional regulator (10488..10068)
merT (10560..10911)
merT mercuric ion transporter MerT (10560..10911)
(10927..11066)
mercuric transport protein periplasmic component (10927..11066)
merA (11716..13093)
merA mercury(II) reductase (11716..13093)
merD (13111..13476)
merD mercuric resistance transcriptional repressor protein MerD (13111..13476)
(13473..13695)
mercury resistance protein (13473..13695)
(20026..19586)
chloramphenicol acetyltransferase CAT (20026..19586)
(20675..20121)
AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase (20675..20121)
(24213..25226)
class 1 integron integrase IntI1 (24213..25226)
(25165..25510)
transposase (25165..25510)
(25548..26105)
recombinase family protein (25548..26105)
(26108..29077)
Tn3 family transposase (26108..29077)
(29156..29342)
IS110 family transposase (29156..29342)
(29547..30074)
IS110 family transposase (29547..30074)
(43270..42772)
hypothetical protein (43270..42772)
(44626..43382)
topoisomerase (44626..43382)
(44967..44737)
hypothetical protein (44967..44737)
(46301..46022)
hypothetical protein (46301..46022)
(48092..47015)
DUF3150 domain-containing protein (48092..47015)
(49061..48190)
ATP-binding protein (49061..48190)
(50091..49270)
hypothetical protein (50091..49270)
(50506..50153)
hypothetical protein (50506..50153)
(51435..50801)
hypothetical protein (51435..50801)
(53451..53102)
ATP-dependent helicase (53451..53102)
(60288..60118)
conjugal transfer protein (60288..60118)
lepB (61052..60528)
lepB signal peptidase I (61052..60528)
(63025..61252)
hypothetical protein (63025..61252)
(64640..63328)
hypothetical protein (64640..63328)
(66921..66485)
HtdA (66921..66485)
(68080..67157)
IS5 family transposase (68080..67157)
(68705..69132)
TrhO (68705..69132)
(70446..70701)
hypothetical protein (70446..70701)
(71639..71411)
hypothetical protein (71639..71411)
(72486..72194)
AAA family ATPase (72486..72194)
(73835..73564)
AAA family ATPase (73835..73564)
(74492..74410)
conjugal transfer protein TraV (74492..74410)
(76967..75958)
conjugal transfer protein TraB (76967..75958)
(77510..77285)
hypothetical protein (77510..77285)
(78978..78855)
traK family protein (78978..78855)
(79140..78980)
conjugal transfer protein TraE (79140..78980)
(79510..79385)
conjugal transfer protein TraE (79510..79385)
(79840..79726)
conjugal transfer protein TraE (79840..79726)
(80011..79859)
plasmid transfer protein (80011..79859)
(92514..92787)
ParA family protein (92514..92787)
(98554..97965)
hypothetical protein (98554..97965)
(101264..100859)
hypothetical protein (101264..100859)
(103805..101400)
DUF4165 domain-containing protein (103805..101400)
(104629..103952)
NYN domain-containing protein (104629..103952)
(105182..104788)
hypothetical protein (105182..104788)
(105738..106091)
hypothetical protein (105738..106091)
(109566..109748)
HNH endonuclease (109566..109748)
(110900..109977)
IS5 family transposase (110900..109977)
(113954..114397)
hypothetical protein (113954..114397)
(115576..116927)
DNA (cytosine-5-)-methyltransferase (115576..116927)
(118165..117017)
restriction endonuclease (118165..117017)
(125005..125511)
hypothetical protein (125005..125511)
(125633..126556)
IS5 family transposase (125633..126556)
(128871..129113)
hypothetical protein (128871..129113)
(129756..130112)
hypothetical protein (129756..130112)
(130310..130164)
NERD domain-containing protein (130310..130164)
(130801..130646)
NERD domain-containing protein (130801..130646)
(131098..130944)
S49 family peptidase (131098..130944)
(132080..131824)
S49 family peptidase (132080..131824)
(132763..132089)
conjugal transfer protein TraJ (132763..132089)
(133498..132776)
hypothetical protein (133498..132776)
(134742..134194)
conjugal transfer protein TraD (134742..134194)
(138309..137681)
conjugal transfer protein TraI (138309..137681)
(138863..138659)
hypothetical protein (138863..138659)
(143243..144280)
thioredoxin family protein (143243..144280)
(144324..145679)
conjugal transfer protein (144324..145679)
(145681..146492)
conjugal transfer protein TraG (145681..146492)
(146963..147397)
conjugal transfer protein TraG (146963..147397)
(147845..148336)
conjugal transfer protein TraG (147845..148336)
(151331..150627)
IS6 family transposase IS15DIV (151331..150627)
(152036..151479)
OsmC family peroxiredoxin (152036..151479)
(152805..152221)
recombinase family protein (152805..152221)
(152965..155943)
Tn3 family transposase (152965..155943)
(156033..157037)
IS110-like element IS4321 family transposase (156033..157037)
(157605..157820)
DNA modification methylase (157605..157820)
(160998..157882)
HsdR family type I site-specific deoxyribonuclease (160998..157882)
(162445..161120)
restriction endonuclease subunit S (162445..161120)
(163998..162442)
type I restriction-modification system subunit M (163998..162442)
(166067..164202)
DUF262 domain-containing protein (166067..164202)
(167206..166283)
IS5 family transposase (167206..166283)
(167932..167408)
hypothetical protein (167932..167408)
(168538..168125)
hypothetical protein (168538..168125)
(168880..168610)
hypothetical protein (168880..168610)
(169478..169942)
hypothetical protein (169478..169942)
(169942..170730)
hypothetical protein (169942..170730)
(170744..170980)
hypothetical protein (170744..170980)
(171092..172060)
IS5 family transposase (171092..172060)
(172443..172570)
ABC transporter ATP-binding protein/permease (172443..172570)
(173598..172618)
IS5-like element ISKpn26 family transposase (173598..172618)
(174632..173667)
DMT family transporter (174632..173667)
(175447..174629)
amino acid ABC transporter ATP-binding protein (175447..174629)
(176114..175452)
amino acid ABC transporter permease (176114..175452)
(176782..176111)
amino acid ABC transporter permease (176782..176111)
(177654..176806)
ABC transporter substrate-binding protein (177654..176806)
(177811..178764)
LysR family transcriptional regulator (177811..178764)
(178851..180062)
M24 family metallopeptidase (178851..180062)
(180408..180334)
permease (180408..180334)
(181324..180401)
IS5 family transposase (181324..180401)
(181674..181934)
hypothetical protein (181674..181934)
(183091..182123)
IS5 family transposase (183091..182123)
(184043..183093)
IS5 family transposase (184043..183093)
(184645..184175)
RES domain-containing protein (184645..184175)
(185085..184642)
hypothetical protein (185085..184642)
(186334..185186)
DNA polymerase V subunit UmuC (186334..185186)
(187868..186381)
hypothetical protein (187868..186381)
(188846..187923)
IS5 family transposase (188846..187923)
(189624..188920)
IS5 family transposase (189624..188920)
(191016..189721)
IS66 family transposase (191016..189721)
(191412..191065)
IS66 family insertion sequence hypothetical protein (191412..191065)
(191723..191409)
IS66 family insertion sequence hypothetical protein (191723..191409)
(191733..191913)
cytochrome B562 (191733..191913)
(192487..192020)
2-alkenal reductase (192487..192020)
(193513..192551)
Zn-dependent protease (193513..192551)
(193988..193500)
diguanylate cyclase (193988..193500)
(194338..194000)
GGDEF domain-containing protein (194338..194000)
(194678..194487)
hypothetical protein (194678..194487)
clpK (197473..194678)
clpK heat shock survival AAA family ATPase ClpK (197473..194678)
(198123..197554)
Hsp20/alpha crystallin family protein (198123..197554)
(198438..198157)
DNA-binding protein (198438..198157)
(198931..198668)
hypothetical protein (198931..198668)
(199185..198931)
hypothetical protein (199185..198931)
(199154..199318)
IS66 family transposase (199154..199318)
(199709..199588)
AAA family ATPase (199709..199588)
(200874..199801)
transposase (200874..199801)
(201352..200963)
IS5/IS1182 family transposase (201352..200963)
(201444..201343)
IS66 family insertion sequence hypothetical protein (201444..201343)
(201435..201839)
IS66 family insertion sequence hypothetical protein (201435..201839)
(201836..202183)
IS66 family insertion sequence hypothetical protein (201836..202183)
(202232..202980)
hypothetical protein (202232..202980)
(203003..203371)
IS66 family transposase (203003..203371)
(204005..203571)
copper-binding protein (204005..203571)
(205621..204221)
sensor histidine kinase (205621..204221)
(206298..205618)
DNA-binding response regulator (206298..205618)
(207282..206353)
copper resistance protein CopD (207282..206353)
pcoC (207667..207287)
pcoC copper resistance system chaperone PcoC (207667..207287)
(208603..207707)
copper resistance protein B (208603..207707)
pcoA (210420..208603)
pcoA multicopper oxidase PcoA (210420..208603)
(210655..211104)
copper resistance protein (210655..211104)
(211393..212130)
peptidase M23 (211393..212130)
(212361..212164)
DUF2933 domain-containing protein (212361..212164)
(214843..212402)
haloacid dehalogenase (214843..212402)
(215411..214971)
hypothetical protein (215411..214971)
(218644..215498)
CusA/CzcA family heavy metal efflux RND transporter (218644..215498)
(219947..218655)
efflux RND transporter periplasmic adaptor subunit (219947..218655)
(220414..220061)
copper ABC transporter substrate-binding protein (220414..220061)
(221828..220443)
Cu(I)/Ag(I) efflux RND transporter outer membrane protein (221828..220443)
(222018..222698)
DNA-binding response regulator (222018..222698)
(222691..224166)
Cu(+)/Ag(+) sensor histidine kinase (222691..224166)
silE (224417..224848)
silE silver-binding protein SilE (224417..224848)
(224992..225342)
DUF305 domain-containing protein (224992..225342)
(226638..225730)
HNH endonuclease (226638..225730)
(227069..228037)
IS5 family transposase (227069..228037)
(228612..229709)
RepB family plasmid replication initiator protein (228612..229709)
(230949..231062)
IS3 family transposase (230949..231062)
(232304..231288)
IS110 family transposase (232304..231288)
(232371..233332)
IS3 family transposase (232371..233332)
(233543..234079)
plasmid transfer protein (233543..234079)
(234490..234217)
IS3 family transposase (234490..234217)
(234594..234737)
transcriptional regulator (234594..234737)
(234840..235567)
site-specific integrase (234840..235567)
(237399..236389)
replication initiation protein (237399..236389)
(237429..237710)
hypothetical protein (237429..237710)
(238173..237925)
hypothetical protein (238173..237925)
(238129..239295)
plasmid-partitioning protein SopA (238129..239295)
(239295..240266)
ParB/RepB/Spo0J family plasmid partition protein (239295..240266)
(240909..241243)
hypothetical protein (240909..241243)
(241862..241634)
type II toxin-antitoxin system Phd/YefM family antitoxin (241862..241634)
(242123..241941)
DUF4113 domain-containing protein (242123..241941)
(242320..242760)
IS66 family insertion sequence hypothetical protein (242320..242760)
(242757..243107)
IS66 family insertion sequence hypothetical protein (242757..243107)
(243138..244730)
IS66-like element ISKox1 family transposase (243138..244730)
(244824..245279)
hypothetical protein (244824..245279)
(245842..245339)
hypothetical protein (245842..245339)
(247446..245878)
hypothetical protein (247446..245878)
(248711..247497)
ABC transporter permease (248711..247497)
(249426..248701)
ABC transporter ATP-binding protein (249426..248701)
(251393..249426)
VWA domain-containing protein (251393..249426)
(252409..251390)
hypothetical protein (252409..251390)
(255117..252403)
hypothetical protein (255117..252403)
(258185..255117)
virulence factor SrfB (258185..255117)
(259651..258203)
hypothetical protein (259651..258203)
(260813..259701)
tellurite resistance domain protein (260813..259701)
(261377..260895)
hypothetical protein (261377..260895)
(262194..261457)
hypothetical protein (262194..261457)
(263312..262615)
IS1 family transposase (263312..262615)
(263330..263539)
IS3 family transposase (263330..263539)
(264526..263558)
IS110 family transposase (264526..263558)
(264694..265769)
IS3 family transposase (264694..265769)
(265790..266233)
hypothetical protein (265790..266233)
(266243..266650)
hypothetical protein (266243..266650)
(266693..267652)
DNA replication protein (266693..267652)
(267649..268407)
hypothetical protein (267649..268407)
(268404..268727)
hypothetical protein (268404..268727)
(268879..269196)
hypothetical protein (268879..269196)
(270398..269262)
recombinase (270398..269262)
ltrA (271969..270484)
ltrA group II intron reverse transcriptase/maturase (271969..270484)
(272181..271969)
hypothetical protein (272181..271969)
(272473..272727)
hypothetical protein (272473..272727)
(272813..273874)
hypothetical protein (272813..273874)
(274195..275094)
RepB family plasmid replication initiator protein (274195..275094)
(275221..276341)
IS3 family transposase (275221..275479)
(278476..278814)
hypothetical protein (278476..278814)
(279223..279489)
hypothetical protein (279223..279489)
kop (280539..281474)
kop omptin family outer membrane protease Kop (280539..281474)
(281976..282428)
hypothetical protein (281976..282428)
(282985..282671)
hypothetical protein (282985..282671)
(283218..283015)
hypothetical protein (283218..283015)
(283961..284173)
hypothetical protein (283961..284173)
(284267..284545)
hypothetical protein (284267..284545)
(285905..284901)
IS110 family transposase (285905..284901)
(286276..286695)
DUF2946 domain-containing protein (286276..286695)
(286778..288841)
TonB-dependent copper receptor (286778..288841)
(288898..289158)
DUF2534 family protein (288898..289158)
(289533..289255)
hypothetical protein (289533..289255)
(290637..289657)
IS5-like element ISKpn26 family transposase (290637..289657)
(292271..291006)
hypothetical protein (292271..291006)
(293740..292484)
MFS transporter (293740..292484)
(294105..294953)
dihydroorotate dehydrogenase electron transfer subunit (294105..294953)
(294946..295887)
dihydroorotate dehydrogenase (294946..295887)
(295924..297180)
Zn-dependent hydrolase (295924..297180)
(297177..298253)
dihydroorotase (297177..298253)
(298418..299314)
XRE family transcriptional regulator (298418..299314)
(299395..299721)
hypothetical protein (299395..299721)
(299919..299791)
mannonate dehydratase (299919..299791)
(300142..299960)
IS3 family transposase (300142..299960)
(300143..300241)
glycosyltransferase (300143..300241)
(300198..300895)
IS1 family transposase (300198..300895)
(301059..300889)
galactoside O-acetyltransferase (301059..300889)
lacY (302369..301116)
lacY MFS transporter (302369..301116)
lacZ (305480..302421)
lacZ beta-galactosidase (305480..302421)
lacI (306670..305588)
lacI lac repressor (306670..305588)
(306908..307918)
zinc-binding alcohol dehydrogenase family protein (306908..307918)
(308325..309329)
IS110-like element IS4321 family transposase (308325..309329)
(309632..309874)
EAL domain-containing protein (309632..309874)
(310130..309903)
IS66 family transposase (310130..309903)
(310498..310205)
IS66 family insertion sequence hypothetical protein (310498..310205)
(311364..310597)
iron-dicitrate ABC transporter ATP-binding subunit (311364..310597)
fecD (312321..311365)
fecD iron-dicitrate ABC transporter permease FecD (312321..311365)
fecC (313316..312318)
fecC iron-dicitrate ABC transporter permease FecC (313316..312318)
fecB (314215..313313)
fecB Fe(3+)-dicitrate ABC transporter substrate-binding protein FecB (314215..313313)
(316584..314260)
TonB-dependent siderophore receptor (316584..314260)
(317624..316671)
fec operon regulator FecR (317624..316671)
(318142..317621)
RNA polymerase subunit sigma (318142..317621)
(318244..318167)
glutamate decarboxylase (318244..318167)
(319050..318619)
IS21 family transposase (319050..318619)
(319357..319049)
IS3 family transposase (319357..319049)
(320450..319374)
IS110 family transposase (320450..319374)
(320584..320372)
transposase (320584..320372)
(321470..320732)
IS3 family transposase (321470..320732)
(321526..321461)
aldehyde dehydrogenase (321526..321461)
(321666..321496)
galactoside O-acetyltransferase (321666..321496)
lacY (322977..321733)
lacY MFS transporter (322977..321733)
lacZ (326103..323029)
lacZ beta-galactosidase (326103..323029)
lacI (327307..326225)
lacI LacI family DNA-binding transcriptional regulator (327307..326225)
(327660..327833)
zinc-binding alcohol dehydrogenase family protein (327660..327833)
(328037..328441)
DUF2251 domain-containing protein (328037..328441)
(329199..328717)
hypothetical protein (329199..328717)
(330540..329578)
kinase (330540..329578)
(330665..331589)
IS5 family transposase (330665..331589)
(331685..332607)
IS5 family transposase (331685..332607)
(333389..333210)
hypothetical protein (333389..333210)
(333516..333640)
IS1 family transposase (333516..333640)
(333739..334145)
IS1 family transposase (333739..334145)
(334590..334818)
IS3 family transposase (334590..334818)
(335140..334863)
IS5/IS1182 family transposase (335140..334863)
(342860..343090)
AbrB/MazE/SpoVT family DNA-binding domain-containing protein (342860..343090)
(343087..343512)
PIN domain-containing protein (343087..343512)
(343575..344498)
IS5 family transposase (343575..344498)
(344491..345093)
hypothetical protein (344491..345093)
(345146..345319)
nuclease (345146..345319)
(345491..347062)
GGDEF domain-containing protein (345491..347062)
(347267..347154)
hypothetical protein (347267..347154)
(347392..347562)
LysR family transcriptional regulator (347392..347562)
(347803..347687)
IS3 family transposase (347803..347687)
(349928..348808)
IS3 family transposase (349928..349670)
(350260..350000)
integrase (350260..350000)
(351238..350316)
IS5 family transposase (351238..350316)
(351480..351301)
IS5/IS1182 family transposase (351480..351301)
(353058..351520)
IS66 family transposase (353058..351520)
(353454..353107)
IS66 family insertion sequence hypothetical protein (353454..353107)
(353828..353451)
IS66 family insertion sequence hypothetical protein (353828..353451)
(353921..354379)
IS3 family transposase (353921..354379)
(354584..354895)
cytoplasmic protein (354584..354895)
(354892..355311)
helix-turn-helix domain-containing protein (354892..355311)
(355381..355794)
hypothetical protein (355381..355794)
(356763..355840)
IS5 family transposase (356763..355840)
(356912..357178)
hypothetical protein (356912..357178)
(357827..357292)
IS3 family transposase (357827..357292)
(359719..358352)
formimidoylglutamate deiminase (359719..358352)
hutC (359822..360583)
hutC histidine utilization repressor (359822..360583)
(360580..361137)
HutD family protein (360580..361137)
(362703..361171)
aromatic amino acid lyase (362703..361171)
(363589..362714)
glycine/betaine ABC transporter substrate-binding protein (363589..362714)
(364300..363620)
ABC transporter permease (364300..363620)
(364947..364303)
ABC transporter permease subunit (364947..364303)
(366041..364944)
ATP-binding cassette domain-containing protein (366041..364944)
hutU (366549..368225)
hutU urocanate hydratase (366549..368225)
(368279..369673)
cytosine permease (368279..369673)
(369685..370893)
imidazolonepropionase (369685..370893)
hutG (370886..371695)
hutG N-formylglutamate deformylase (370886..371695)
(372265..372080)
MFS transporter (372265..372080)
(372425..372832)
IS66 family insertion sequence hypothetical protein (372425..372832)
(372829..373053)
IS66 family insertion sequence hypothetical protein (372829..373053)
(373501..373121)
IS5/IS1182 family transposase (373501..373121)
(374520..373597)
IS5 family transposase (374520..373597)
(374559..375107)
IS3 family transposase (374559..375107)
(375118..376563)
IS3 family transposase (375118..376563)
(377198..376728)
IS3 family transposase (377198..376728)
(377200..377520)
hypothetical protein (377200..377520)
(378803..377799)
IS110-like element IS4321 family transposase (378803..377799)
(379058..378897)
hypothetical protein (379058..378897)
(380004..379252)
alpha/beta hydrolase (380004..379252)
(380246..380500)
EamA family transporter (380246..380500)
(381381..380608)
SDR family NAD(P)-dependent oxidoreductase (381381..380608)
(382148..381447)
DsbA family oxidoreductase (382148..381447)
(383320..382214)
alkene reductase (383320..382214)
(383533..383862)
thioredoxin (383533..383862)
(384230..383892)
carboxymuconolactone decarboxylase family protein (384230..383892)
(384816..384235)
TetR/AcrR family transcriptional regulator (384816..384235)
(385643..384939)
IS6 family transposase IS15DIV (385643..384939)
(396968..396264)
IS6 family transposase IS15DIV (396968..396264)
(396945..397055)
transporter (396945..397055)
(397781..397961)
hypothetical protein (397781..397961)
(398498..399708)
viral (Super1) RNA helicase (398498..399708)
(401017..400855)
lytic transglycosylase (401017..400855)
(401240..401968)
thiol:disulfide interchange protein (401240..401968)
(403825..403924)
thioredoxin (403825..403924)
(407633..407483)
type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family (407633..407483)
(407951..407784)
plasmid stabilization protein (407951..407784)
(408587..408294)
hypothetical protein (408587..408294)
(414435..414643)
hypothetical protein (414435..414643)
(422088..422187)
IS5/IS1182 family transposase (422088..422187)
(422379..422964)
IS5 family transposase (422379..422964)
(425107..424900)
porin OmpC (425107..424900)
(425921..425358)
porin OmpC (425921..425358)
(428584..429155)
IS5 family transposase (428584..429155)
(429831..430032)
HAD-IB family hydrolase (429831..430032)
(431101..430792)
tellurium resistance protein TerF (431101..430792)
(432312..432111)
IS91 family transposase (432312..432111)
(434165..432717)
IS91 family transposase (434165..432717)
(435502..434663)
sulfonamide-resistant dihydropteroate synthase Sul1 (435502..434663)
qacE (435843..435496)
qacE quaternary ammonium compound efflux SMR transporter QacE delta 1 (435843..435496)
(437243..436780)
type B chloramphenicol O-acetyltransferase (437243..436780)
(438211..437381)
oxacillin-hydrolyzing class D beta-lactamase OXA-1 (438211..437381)
(438896..438342)
fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5 (438896..438342)
(439198..440211)
class 1 integron integrase IntI1 (439198..440211)
(440150..440430)
restriction endonuclease (440150..440430)
(440830..440942)
recombinase family protein (440830..440942)
(442547..443104)
hypothetical protein (442547..443104)
(443280..443939)
hypothetical protein (443280..443939)
(445159..444464)
class A beta-lactamase (445159..444464)
(450160..449618)
tunicamycin resistance protein (450160..449618)
aac(3) (451033..450173)
aac(3) aminoglycoside N-acetyltransferase AAC(3)-IIa (451033..450173)
(451266..451970)
IS6 family transposase IS15DIV (451266..451970)