INTEGRALL

The Integron Database

Escherichia coli
Accession Number: CP041542
Source: blood - USA
Journal: Unpublished
Published: 18-JUL-2019
Title: Environmental and genetic determinants of plasmid mobility in pathogenic Escherichia coli
Authors: Song,W.
Remarks: Class 1 integron. In54
Promoter: PcH1
Gene Product Sequence
(1..292)
IS1-like element IS1A family transposase (1..292)
(1568..546)
DNA helicase UvrD (1568..546)
(3118..1553)
ATP-dependent endonuclease (3118..1553)
(3609..3193)
type II toxin-antitoxin system VapC family toxin (3609..3193)
(3836..3606)
AbrB/MazE/SpoVT family DNA-binding domain-containing protein (3836..3606)
(4187..8011)
pcar (4187..8011)
(8472..8056)
type II toxin-antitoxin system VapC family toxin (8472..8056)
(8699..8469)
AbrB/MazE/SpoVT family DNA-binding domain-containing protein (8699..8469)
(8964..9464)
hypothetical protein (8964..9464)
(9477..10250)
hypothetical protein (9477..10250)
(12074..10461)
IS66-like element ISEc23 family transposase (12074..10461)
tnpB (12455..12105)
tnpB IS66 family insertion sequence element accessory protein TnpB (12455..12105)
(12877..12452)
IS66 family insertion sequence hypothetical protein (12877..12452)
(12939..14090)
hypothetical protein (12939..14090)
(14636..14124)
hypothetical protein (14636..14124)
ccdA (15182..15400)
ccdA type II toxin-antitoxin system antitoxin CcdA (15182..15400)
ccdB (15402..15707)
ccdB type II toxin-antitoxin system toxin CcdB (15402..15707)
(15708..16514)
phage integrase family protein (15708..16514)
repE (17288..18043)
repE replication initiation protein RepE (17288..18043)
sopA (18631..19797)
sopA plasmid-partitioning protein SopA (18631..19797)
(19797..20768)
ParB/RepB/Spo0J family plasmid partition protein (19797..20768)
(20850..21287)
hypothetical protein (20850..21287)
(21325..21597)
hypothetical protein (21325..21597)
(21635..22537)
DUF1281 domain-containing protein (21635..22537)
(22541..22845)
hypothetical protein (22541..22845)
(22922..23605)
DNA methylase (22922..23605)
(23606..23827)
hypothetical protein (23606..23827)
(23841..24275)
DUF1380 domain-containing protein (23841..24275)
(24326..25090)
hypothetical protein (24326..25090)
(24975..25546)
DUF1472 domain-containing protein (24975..25546)
(25642..25944)
antirestriction protein (25642..25944)
(25991..26413)
DUF1380 domain-containing protein (25991..26413)
(26410..26601)
hypothetical protein (26410..26601)
(27375..26953)
hypothetical protein (27375..26953)
(27636..27866)
hypothetical protein (27636..27866)
(27918..29279)
DUF3560 domain-containing protein (27918..29279)
(29326..29889)
class I SAM-dependent methyltransferase (29326..29889)
(29889..30113)
hypothetical protein (29889..30113)
(30041..30283)
hypothetical protein (30041..30283)
(30411..30187)
hypothetical protein (30411..30187)
(30334..30525)
hypothetical protein (30334..30525)
(30688..30455)
hypothetical protein (30688..30455)
(30587..30727)
single-stranded DNA-binding protein (30587..30727)
(30753..31280)
single-stranded DNA-binding protein (30753..31280)
(31336..31569)
DUF905 domain-containing protein (31336..31569)
(31628..33586)
ParB/RepB/Spo0J family partition protein (31628..33586)
psiB (33641..34075)
psiB conjugation system SOS inhibitor PsiB (33641..34075)
(34072..34215)
hypothetical protein (34072..34215)
(34409..35950)
IS21-like element ISEc12 family transposase (34409..35950)
(35965..36711)
ATP-binding protein (35965..36711)
(36799..37377)
plasmid SOS inhibition protein A (36799..37377)
(37657..37815)
type I toxin-antitoxin system Hok family toxin (37657..37815)
(38035..38265)
hypothetical protein (38035..38265)
(38316..38507)
hypothetical protein (38316..38507)
(38670..38437)
hypothetical protein (38670..38437)
(38569..38709)
single-stranded DNA-binding protein (38569..38709)
(38734..39021)
hypothetical protein (38734..39021)
(39142..39963)
DUF945 domain-containing protein (39142..39963)
(40907..40260)
lytic transglycosylase (40907..40260)
traM (41193..41576)
traM relaxosome protein TraM (41193..41576)
(41770..42456)
PAS domain-containing protein (41770..42456)
(42550..42777)
relaxosome protein TraY (42550..42777)
(42811..43173)
pilin (42811..43173)
traL (43178..43489)
traL type IV conjugative transfer system protein TraL (43178..43489)
traE (43511..44077)
traE type IV conjugative transfer system protein TraE (43511..44077)
traK (44121..44792)
traK type-F conjugative transfer system secretin TraK (44121..44792)
(44792..46219)
conjugal transfer protein TraB (44792..46219)
(46209..46793)
conjugal transfer protein TraP (46209..46793)
(46747..47100)
DUF2689 domain-containing protein (46747..47100)
(47093..47344)
conjugal transfer protein TrbG (47093..47344)
traV (47341..47856)
traV type IV conjugative transfer system lipoprotein TraV (47341..47856)
traR (47991..48212)
traR conjugal transfer protein TraR (47991..48212)
traC (48372..50999)
traC type IV secretion system protein TraC (48372..50999)
trbI (50996..51382)
trbI type-F conjugative transfer system protein TrbI (50996..51382)
traW (51379..52011)
traW type-F conjugative transfer system protein TraW (51379..52011)
(52008..53000)
conjugal transfer protein TraU (52008..53000)
(53030..53335)
hypothetical protein (53030..53335)
trbC (53344..53982)
trbC type-F conjugative transfer system pilin assembly protein TrbC (53344..53982)
traN (53979..55787)
traN type-F conjugative transfer system mating-pair stabilization protein TraN (53979..55787)
(55814..56071)
conjugal transfer protein TrbE (55814..56071)
traF (56064..56807)
traF type-F conjugative transfer system pilin assembly protein TraF (56064..56807)
trbA (56823..57161)
trbA conjugal transfer protein TrbA (56823..57161)
traQ (57288..57572)
traQ type-F conjugative transfer system pilin chaperone TraQ (57288..57572)
trbB (57559..58104)
trbB type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB (57559..58104)
trbJ (58034..58375)
trbJ P-type conjugative transfer protein TrbJ (58034..58375)
(58323..58748)
conjugal transfer protein TrbF (58323..58748)
(58735..60108)
conjugal transfer protein TraH (58735..60108)
(60105..62924)
conjugal transfer protein TraG (60105..62924)
(62943..63440)
entry exclusion protein (62943..63440)
traT (63472..64203)
traT complement resistance protein TraT (63472..64203)
traD (64456..66672)
traD type IV conjugative transfer system coupling protein TraD (64456..66672)
traI (66672..71942)
traI conjugative transfer relaxase/helicase TraI (66672..71942)
traX (71962..72708)
traX type-F conjugative transfer system pilin acetylase TraX (71962..72708)
(72767..73627)
alpha/beta hydrolase (72767..73627)
finO (73730..74290)
finO fertility inhibition protein FinO (73730..74290)
(74419..74631)
ANR family transcriptional regulator (74419..74631)
(74876..75337)
endonuclease (74876..75337)
hha (75383..75592)
hha hemolysin expression modulator Hha (75383..75592)
(75630..76220)
DUF2726 domain-containing protein (75630..76220)
(76460..76720)
replication regulatory protein RepA (76460..76720)
(76864..76751)
replication protein RepA (76864..76751)
(76945..77019)
RepA leader peptide Tap (76945..77019)
repA (77012..77869)
repA incFII family plasmid replication initiator RepA (77012..77869)
(78232..78618)
hypothetical protein (78232..78618)
(79755..78895)
class A broad-spectrum beta-lactamase TEM-1 (79755..78895)
(80495..79938)
recombinase family protein (80495..79938)
(80659..81780)
DUF4158 domain-containing protein (80659..81780)
(81840..82544)
IS6-like element IS26 family transposase (81840..82544)
(82603..82490)
adenine-specific DNA-methyltransferase (82603..82490)
mph(A) (82666..83571)
mph(A) Mph(A) family macrolide 2'-phosphotransferase (82666..83571)
(83568..84806)
MFS transporter (83568..84806)
(84806..85390)
TetR/AcrR family transcriptional regulator (84806..85390)
(85336..85692)
hypothetical protein (85336..85692)
(85822..85911)
type VII secretion-associated protein (85822..85911)
(86647..85883)
IS6-like element IS6100 family transposase (86647..85883)
(86676..86858)
resolvase (86676..86858)
(87179..86874)
helix-turn-helix transcriptional regulator (87179..86874)
chrA (88395..87190)
chrA chromate efflux transporter (88395..87190)
(88754..88551)
hypothetical protein (88754..88551)
(88773..88952)
hypothetical protein (88773..88952)
sul1 (89721..88882)
sul1 sulfonamide-resistant dihydropteroate synthase Sul1 (89721..88882)
(90062..89715)
quaternary ammonium compound efflux SMR transporter QacE delta 1 (90062..89715)
(91056..90268)
ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5 (91056..90268)
(91660..91187)
trimethoprim-resistant dihydrofolate reductase DfrA17 (91660..91187)
intI1 (91818..92831)
intI1 class 1 integron integrase IntI1 (91818..92831)
(92776..93030)
hypothetical protein (92776..93030)
(93034..93384)
DUF3330 domain-containing protein (93034..93384)
(93510..93839)
hypothetical protein (93510..93839)
(94434..93730)
IS6-like element IS26 family transposase (94434..93730)
(94459..95655)
IS3 family transposase (94459..95655)
(95677..95910)
Tn3 family transposase (95677..95910)
(95987..96295)
IS4 family transposase (95987..96295)
(97664..96354)
ABC transporter substrate-binding protein (97664..96354)
(98730..97657)
ABC transporter ATP-binding protein (98730..97657)
(99560..98736)
phosphodiesterase (99560..98736)
(100458..99571)
carbohydrate ABC transporter permease (100458..99571)
(101314..100448)
sugar ABC transporter permease (101314..100448)
(101897..101457)
zinc-binding dehydrogenase (101897..101457)
(101871..102065)
hypothetical protein (101871..102065)
(102298..103188)
dihydrodipicolinate synthase family protein (102298..103188)
(103213..103593)
RidA family protein (103213..103593)
kdgT (103626..104591)
kdgT 2-keto-3-deoxygluconate transporter (103626..104591)
(105389..104637)
IclR family transcriptional regulator (105389..104637)
(105994..106278)
ribbon-helix-helix protein, CopG family (105994..106278)
(106278..106553)
type II toxin-antitoxin system RelE/ParE family toxin (106278..106553)
(106659..106952)
hypothetical protein (106659..106952)
(107115..106987)
transposase (107115..106987)
(108317..107148)
hypothetical protein (108317..107148)
(108811..109118)
type II toxin-antitoxin system ParD family antitoxin (108811..109118)
(109234..109373)
type II toxin-antitoxin system RelE/ParE family toxin (109234..109373)
(109407..109813)
IS1 family transposase (109407..109813)