INTEGRALL

The Integron Database

Escherichia coli
Accession Number: CP042894
Source: Raw milk cheese - Egypt
Journal: Unpublished
Published: 20-AUG-2019
Title: Complete Genome Sequencing of Colistin and Cefotaxime Resistant E. coli Strains from Egypt
Authors: Hoffmann,M., Hammad,A.
Remarks: Class 1 integron. In1756
Promoter: PcWTGN-10
Gene Product Sequence
(740..84)
quinolone resistance pentapeptide repeat protein QnrS11 (740..84)
(1108..1299)
hypothetical protein (1108..1299)
(1949..1245)
IS6-like element IS26 family transposase (1949..1245)
(2013..3848)
Tn3 family transposase (2013..3848)
(4439..3882)
IS91 family transposase (4439..3882)
(4856..4551)
LysR family transcriptional regulator (4856..4551)
floR (6098..4884)
floR chloramphenicol/florfenicol efflux MFS transporter FloR (6098..4884)
(7198..6315)
DUF3363 domain-containing protein (7198..6315)
(8152..7229)
IS91 family transposase (8152..7229)
(9112..8276)
aminoglycoside O-phosphotransferase APH(6)-Id (9112..8276)
aph(3'')-Ib (9915..9112)
aph(3'')-Ib aminoglycoside O-phosphotransferase APH(3'')-Ib (9915..9112)
sul2 (10791..9976)
sul2 sulfonamide-resistant dihydropteroate synthase Sul2 (10791..9976)
(10815..10892)
transcriptional regulator (10815..10892)
(11950..11099)
replication protein (11950..11099)
(12656..11937)
AAA family ATPase (12656..11937)
(12647..13138)
recombinase family protein (12647..13138)
(13141..16107)
Tn3-like element TnAs3 family transposase (13141..16107)
(16174..16551)
GNAT family N-acetyltransferase (16174..16551)
(16803..17431)
IS1 family transposase (16803..17431)
(17556..18953)
HAMP domain-containing protein (17556..18953)
(22289..19143)
helicase (22289..19143)
(22649..22518)
replication protein RepA4 (22649..22518)
(22902..23153)
type II toxin-antitoxin system Phd/YefM family antitoxin (22902..23153)
(23150..23437)
type II toxin-antitoxin system RelE/ParE family toxin (23150..23437)
(23927..23727)
DUF839 domain-containing protein (23927..23727)
(23917..24122)
transposase (23917..24122)
(27794..24297)
autotransporter outer membrane beta-barrel domain-containing protein (27794..24297)
(28624..28379)
IS91 family transposase (28624..28379)
(29837..28686)
IS3 family transposase (29837..28686)
(30094..30288)
iron-containing alcohol dehydrogenase (30094..30288)
(31177..30443)
helix-turn-helix domain-containing protein (31177..30443)
(31267..31575)
PerC family transcriptional regulator (31267..31575)
(31839..32293)
IS1 family transposase (31839..32293)
(32343..33616)
IS3 family transposase (32343..32703)
(33631..33858)
IS1 family transposase (33631..33858)
(34244..34941)
IS1 family transposase (34244..34941)
bcsC (38660..35187)
bcsC cellulose biosynthesis protein BcsC (38660..35187)
(38794..38642)
endo-1,4-D-glucanase (38794..38642)
tnpA (39513..39127)
tnpA IS200/IS605 family transposase (39513..39127)
ltrA (41045..39699)
ltrA group II intron reverse transcriptase/maturase (41045..39699)
(41393..41485)
virulence protein (41393..41485)
(43921..41771)
cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB (43921..41771)
bcsA (46090..43985)
bcsA UDP-forming cellulose synthase catalytic subunit (46090..43985)
(46737..46284)
IS91 family transposase (46737..46284)
(46864..47561)
IS1 family transposase (46864..47561)
(48701..47703)
IS5-like element ISKpn26 family transposase (48701..47703)
(49807..49110)
IS1 family transposase (49807..49110)
(50213..51097)
RepB family plasmid replication initiator protein (50213..51097)
(51390..52199)
GIY-YIG nuclease family protein (51390..52199)
(52368..53564)
ParA family protein (52368..53564)
(53581..54582)
ParB/RepB/Spo0J family partition protein (53581..54582)
(54808..56514)
hypothetical protein (54808..56514)
(56574..57053)
hypothetical protein (56574..57053)
(57100..58373)
IS3 family transposase (57100..57460)
(58384..59499)
hypothetical protein (58384..59499)
(59509..60324)
hypothetical protein (59509..60324)
(60360..60941)
hypothetical protein (60360..60941)
(60953..61462)
baseplate protein (60953..61462)
(61622..62734)
IS4-like element IS421 family transposase (61622..62734)
(63083..62928)
type I toxin-antitoxin system Hok family toxin (63083..62928)
(63481..64699)
IS3 family transposase (63481..64699)
(64997..65694)
IS1 family transposase (64997..65694)
(66723..65851)
hypothetical protein (66723..65851)
(67363..66899)
helix-turn-helix transcriptional regulator (67363..66899)
(68203..67506)
IS1 family transposase (68203..67506)
(68532..68341)
hypothetical protein (68532..68341)
(68629..68498)
IS3 family transposase (68629..68498)
(68911..70269)
esterase-like activity of phytase family protein (68911..70269)
(71452..70508)
IS66 family transposase (71452..70508)
(71520..71735)
transposase (71520..71735)
(72476..71779)
IS1 family transposase (72476..71779)
(73577..72531)
helicase (73577..72531)
(74310..73588)
hypothetical protein (74310..73588)
(74792..74307)
plasmid transfer protein (74792..74307)
(75818..76348)
hypothetical protein (75818..76348)
(76351..76862)
hypothetical protein (76351..76862)
(77424..78121)
IS1 family transposase (77424..78121)
(78114..78323)
hypothetical protein (78114..78323)
(78546..78361)
hypothetical protein (78546..78361)
(78788..78645)
HNH endonuclease (78788..78645)
(79622..78924)
IS1 family transposase (79622..78924)
(79679..80236)
tryptophan permease (79679..80236)
(82260..80707)
L-lactate permease (82260..80707)
(83443..82746)
IS1 family transposase (83443..82746)
cadR (83574..83981)
cadR Cd(II)/Pb(II)-responsive transcriptional regulator (83574..83981)
(84190..86001)
sensor histidine kinase (84190..86001)
(86013..86669)
response regulator transcription factor (86013..86669)
(86748..87445)
IS1 family transposase (86748..87445)
(87740..87456)
hypothetical protein (87740..87456)
ettA (89523..87856)
ettA energy-dependent translational throttle protein EttA (89523..87856)
(90363..89716)
hypothetical protein (90363..89716)
(92869..90446)
molybdopterin-dependent oxidoreductase (92869..90446)
(93735..92908)
dimethyl sulfoxide reductase (93735..92908)
dmsB (94364..93738)
dmsB dimethylsulfoxide reductase subunit B (94364..93738)
(95483..94515)
IS5 family transposase (95483..94515)
(96452..95485)
IS30 family transposase (96452..95485)
(96529..96449)
gamma-D-glutamyl-meso-diaminopimelate amidase (96529..96449)
(96517..96942)
IS3 family transposase (96517..96942)
(97306..96938)
hypothetical protein (97306..96938)
ltrA (97615..99123)
ltrA group II intron reverse transcriptase/maturase (97615..99123)
(99204..99671)
IS3 family transposase (99204..99671)
(99704..100015)
VRR-NUC domain-containing protein (99704..100015)
(100082..100237)
norphogenetic protein (100082..100237)
(100179..100841)
norphogenetic protein (100179..100841)
(100739..101365)
norphogenetic protein (100739..101365)
(101362..102039)
serine/threonine protein phosphatase (101362..102039)
(102036..102737)
hypothetical protein (102036..102737)
(102819..103037)
hypothetical protein (102819..103037)
(103039..104301)
hypothetical protein (103039..104301)
(104374..104880)
3'-phosphatase (104374..104880)
(108261..105145)
HsdR family type I site-specific deoxyribonuclease (108261..105145)
(109636..108383)
restriction endonuclease subunit S (109636..108383)
(111180..109633)
type I restriction-modification system subunit M (111180..109633)
(111206..112186)
IS5-like element ISKpn26 family transposase (111206..112186)
(112529..112744)
hypothetical protein (112529..112744)
(112747..112998)
DNA polymerase III subunit theta (112747..112998)
(113097..113486)
DNA repair protein (113097..113486)
(113559..113780)
type II toxin-antitoxin system Phd/YefM family antitoxin (113559..113780)
(113780..114160)
type II toxin-antitoxin system death-on-curing family toxin (113780..114160)
(114165..114344)
PdcA protein (114165..114344)
(114372..115415)
DUF968 domain-containing protein (114372..115415)
(115669..115890)
host cell division inhibitor Icd-like protein (115669..115890)
(115887..117005)
phage antirepressor Ant (115887..117005)
(117889..117038)
hypothetical protein (117889..117038)
(118209..118000)
c1 repressor inactivator (118209..118000)
(118270..118175)
peptidase (118270..118175)
(118402..118289)
peptidase (118402..118289)
(118814..119035)
creatininase (118814..119035)
(119043..120074)
tyrosine-type recombinase/integrase (119043..120074)
(120125..120436)
lysogeny establishment protein (120125..120436)
(120684..121244)
recombinase (120684..121244)
(121434..122075)
maturation control protein (121434..122075)
(122166..123206)
hypothetical protein (122166..123206)
(123206..123715)
hypothetical protein (123206..123715)
(124022..123774)
modulator protein (124022..123774)
(124459..124019)
peptide-binding protein (124459..124019)
(125290..124493)
helicase (125290..124493)
(127074..125323)
Tn3-like element TnAs1 family transposase (127074..125323)
(127078..127470)
cysteine hydrolase (127078..127470)
(127608..128492)
EamA family transporter (127608..128492)
tet(A) (129722..128524)
tet(A) tetracycline efflux MFS transporter Tet(A) (129722..128524)
(129801..130478)
TetR family transcriptional regulator (129801..130478)
(130739..130510)
relaxase (130739..130510)
(131416..131228)
hypothetical protein (131416..131228)
(131555..131373)
hypothetical protein (131555..131373)
(131548..131681)
short-chain dehydrogenase (131548..131681)
(132333..131627)
IS6-like element IS26 family transposase (132333..131627)
(132324..132401)
replication initiator protein (132324..132401)
(132781..132380)
IS91 family transposase (132781..132380)
(133790..132930)
class A broad-spectrum beta-lactamase TEM-1 (133790..132930)
(134081..134785)
IS6-like element IS26 family transposase (134081..134785)
(134853..134731)
5,10-methylenetetrahydrofolate reductase (134853..134731)
(135790..134999)
ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2 (135790..134999)
(136085..135796)
DUF1010 domain-containing protein (136085..135796)
dfrA12 (136694..136197)
dfrA12 trimethoprim-resistant dihydrofolate reductase DfrA12 (136694..136197)
intI1 (136839..137852)
intI1 class 1 integron integrase IntI1 (136839..137852)
(137876..137989)
adenine-specific DNA-methyltransferase (137876..137989)
(138639..137935)
IS6-like element IS26 family transposase (138639..137935)
(139333..138761)
recombinase family protein (139333..138761)
(140060..139470)
plasmid pRiA4b ORF-3 family protein (140060..139470)
(140333..140151)
DUF4158 domain-containing protein (140333..140151)
(140495..141109)
recombinase family protein (140495..141109)
(141343..141008)
hypothetical protein (141343..141008)