INTEGRALL

The Integron Database

Escherichia coli plasmid pETN48
Accession Number: FQ482074
Source: n.m.
Journal: Unpublished
Published: 15-OCT-2010
Title: Complete nucleotide sequence of plasmid pTN48 encoding the CTX-M-14 extended spectrum beta-lactamase from an Escherichia coli O102-ST405 strain
Authors: Billard-Pomares,T., Tenaillon,O., Le Nagard,H., Rouy,Z., Cruvellier,S., Medigue,C., Arlet,G., Denamur,E., Branger,C.
Remarks:
Gene Product Sequence
yubO (51..338)
yubO conserved hypothetical protein (51..338)
yubP (348..1277)
yubP conserved hypothetical protein (348..1277)
yubQ (2176..1574)
yubQ X polypeptide (P19 protein); putative transglycosylase (2176..1574)
traM (2497..2880)
traM protein TraM (conjugal transfer protein M) (2497..2880)
traJ (3067..3756)
traJ protein TraJ (Positive regulator of conjugal transfer operon) (3067..3756)
traY (3849..4250)
traY protein TraY (Conjugative transfer: oriT nicking) (3849..4250)
traA (4283..4648)
traA fimbrial protein precursor TraA (Pilin) (4283..4648)
traL (4663..4974)
traL F pilus assembly protein TraL (4663..4974)
traE (4996..5562)
traE F pilus assembly protein TraE (4996..5562)
traK (5549..6277)
traK F pilus assembly protein TraK (5549..6277)
traB (6277..7704)
traB F pilus assembly protein TraB (6277..7704)
traP (7694..8284)
traP putative conjugal transfert protein TraP (7694..8284)
trbD (8238..8468)
trbD conserved hypothetical protein TrbD (8238..8468)
trbG (8480..8731)
trbG conjugal transfer protein TrbG (8480..8731)
tnp (8866..9192)
tnp transposase ORFA, IS629, IS3 family (8866..9192)
tnp (9192..10079)
tnp transposase ORF B, IS629, IS3 family (9192..10079)
traV (10120..10551)
traV F pilus assembly protein TraV (fragment) (10120..10551)
traR (10686..10907)
traR putative conjugal transfer protein TraR (10686..10907)
traC (11067..13694)
traC F pilus assembly protein TraC (11067..13694)
trbI (13691..14077)
trbI F pilus extension/retraction protein TrbI (13691..14077)
traW (14074..14706)
traW F pilus assembly protein TraW (14074..14706)
traU (14703..15695)
traU conjugal transfer protein TraU (14703..15695)
trbC (15701..16342)
trbC F pilus assembly protein TrbC (15701..16342)
traN (16339..18147)
traN conjugal transfer mating contact stabilization protein TraN (16339..18147)
trbE (18174..18431)
trbE conjugal transfer protein TrbE (18174..18431)
traF (18394..19167)
traF conjugal pilus assembly protein TraF (18394..19167)
trbA (19181..19522)
trbA protein trbA (19181..19522)
artA (19838..19503)
artA protein artA (19838..19503)
traQ (19919..20203)
traQ F pilin synthesis protein TraQ (19919..20203)
trbB (20190..20744)
trbB putative disulfide bond isomerase TrbB (20190..20744)
trbJ (20641..21048)
trbJ conjugal transfer protein TrbJ (20641..21048)
TrbF (21002..21394)
TrbF putative TrbF protein (21002..21394)
traH (21378..22754)
traH F pilus assembly protein TraH (21378..22754)
traG (22751..25576)
traG mating contact stabilization protein TraG (22751..25576)
traS (25573..26082)
traS conjugal transfer entry exclusion protein TraS (25573..26082)
traT (26096..26827)
traT complement resistance and surface exclusion outer membrane protein TraT (26096..26827)
traD (27079..29259)
traD conjugal transfer coupling protein TraD (27079..29259)
traI (29259..34379)
traI protein TraI (DNA helicase I) (29259..34379)
traX (34342..35145)
traX F pilin acetylase traX (34342..35145)
finO (35200..35760)
finO fertility inhibition protein FinO (Conjugal transfer repressor) (35200..35760)
yigA (35894..36106)
yigA conserved Hypothetical protein YigA (35894..36106)
insB (36523..36410)
insB InsB protein, IS1 (part1)(fragment) (36523..36410)
insB (36717..36427)
insB InsB protein,IS1 (part2) (fragment) (36717..36427)
(37212..37391)
conserved protein of unknown function (37212..37391)
srnB (37473..37784)
srnB modulator of post-segregation killing protein SrnB (37473..37784)
(38101..37934)
conserved protein of unknown function (38101..37934)
repA2 (38068..38325)
repA2 replication regulatory protein RepA2 (CopB) (38068..38325)
(38543..38453)
CopA (38543..38453)
repA1 (38628..39080)
repA1 replication initiation protein RepA1 truncated (38628..39080)
(39305..39186)
conserved protein of unknown function (39305..39186)
(39553..39308)
exported protein of unknown function (39553..39308)
arcA (40395..41615)
arcA arginine deiminase (40395..41615)
arcC (41626..42537)
arcC carbamate kinase (41626..42537)
arcB (42622..43626)
arcB ornithine carbamoyltransferase (42622..43626)
ArcD (43674..45077)
ArcD ArcD protein, Arginine/ornithine antiporter (43674..45077)
argR (45158..45637)
argR putative arginine repressor (45158..45637)
(45964..45701)
fragment of conserved hypothetical protein, putative transposase ORF1, IS66 family (part 2) (45964..45701)
(46215..45994)
fragment of conserved hypothetical protein, putative transposase (part 1), IS66 family (46215..45994)
tnpB (46596..46246)
tnpB transposase ORFB, IS66 family (46596..46246)
tnpA (46949..46593)
tnpA transposase ORFA, IS66 family (46949..46593)
insB (47441..47064)
insB transposase InsB IS1 (47441..47064)
yihA (47798..48367)
yihA YihA protein; putative exported protein (47798..48367)
(49133..48780)
conserved protein of unknown function (49133..48780)
tnpA (50666..49605)
tnpA transposase, IS110 family (50666..49605)
repA2 (51032..51289)
repA2 replication regulatory protein repA2(copB) (51032..51289)
(51507..51417)
CopA (51507..51417)
repA1 (51592..52449)
repA1 repFII Replication initiation protein RepA1 (51592..52449)
repA4 (52812..53198)
repA4 replication initiation protein RepA4 (52812..53198)
(53388..54041)
putative CAAX amino terminal protease, Tir protein (53388..54041)
pemI (54134..54391)
pemI plasmid stable inheritance repressor protein (54134..54391)
pemK (54324..54725)
pemK protein pemK, Plasmid stable inheritance protein (Kid toxin protein) (54324..54725)
yjcA (55010..56320)
yjcA YjcA hypothetical protein (55010..56320)
insA (56349..56447)
insA insA protein, IS1 (56349..56447)
blaTEM-1 (57457..56597)
blaTEM-1 Beta-lactamase TEM-1 (57457..56597)
tnpR (58053..57643)
tnpR transposase tn03 (58053..57643)
tnpA (58105..58821)
tnpA transposase of IS26, IS6 family (58105..58821)
intl1 (60025..59012)
intl1 Integrase/recombinase (60025..59012)
dhfrVII (60057..60656)
dhfrVII dihydrofolate reductase type VII (60057..60656)
aadA4 (60787..61575)
aadA4 Streptomycin 3''-adenylyltransferase (60787..61575)
qacEdelta1 (61781..62128)
qacEdelta1 quaternary ammonium compound-resistance protein, putative ethidium bromide resistance protein (61781..62128)
sulI (62122..62961)
sulI Dihydropteroate synthase type-1 (62122..62961)
(63089..63292)
conserved protein of unknown function (63089..63292)
chrA (63448..64653)
chrA Chromate transport protein (63448..64653)
padR (64664..64969)
padR PadR, transcriptional regulator of the PadR family (64664..64969)
tnpA (65166..65960)
tnpA transposase IS6100 (65166..65960)
(66444..66151)
conserved protein of unknown function (66444..66151)
mphR (67037..66453)
mphR macrolide 2'-phosphotransferase I repressor A (67037..66453)
mrx (68275..67037)
mrx Hydrophobic protein (68275..67037)
mphA (69177..68272)
mphA macrolide 2'-phosphotransferase I (69177..68272)
tnpA (70015..69299)
tnpA transposase of IS26, IS6 family (70015..69299)
orf1 (70557..70240)
orf1 methyl-accepting chemotaxis protein (fragment) Tn1721 (70557..70240)
iroN (71477..70452)
iroN putative iron outer membrane receptor (71477..70452)
insC (72574..71606)
insC IS903 transposase (72574..71606)
blaCTX-M-14 (73484..72609)
blaCTX-M-14 extended-spectrum beta-lactamase CTX-M-14 (73484..72609)
tnpA (74996..73734)
tnpA ISEcp1B transposase (74996..73734)
orf1 (75182..76228)
orf1 methyl-accepting chemotaxis protein Tn1721 (fragment) (75182..76228)
sul1 (76705..76376)
sul1 dihydropteroate synthetase type-1 (fragment) (76705..76376)
qacEdelta1 (76959..76612)
qacEdelta1 Quaternary ammonium compound-resistance protein, putative ethidium bromide resistance protein (76959..76612)
cmlA (78458..77151)
cmlA chloramphenicol resistance protein (78458..77151)
aacA (79309..78677)
aacA Aminoglycoside N(6')-acetyltransferase (79309..78677)
intIdelta1 (79392..80171)
intIdelta1 Integrase/recombinase (fragment) (79392..80171)
tnpA (80149..80841)
tnpA transposase IS26 (80149..80841)
(81280..80732)
putative insertion sequence IS986/IS6110 transposase (81280..80732)
(81771..81439)
putative transposase IS3/IS911 family protein (81771..81439)
(82384..81842)
conserved protein of unknown function (82384..81842)
aaC(3)-II (83257..82397)
aaC(3)-II aminoglycoside N(3')-acetyltransferase III (83257..82397)
tnpA (83352..84068)
tnpA transposase of IS26, IS6 family (83352..84068)
tnpA (85923..84391)
tnpA transposase ISCR3 (85923..84391)
(86491..86150)
GroEL (modular protein) truncated (86491..86150)
(86901..86452)
protein of unknown function (86901..86452)
ermB (88268..87531)
ermB rRNA adenine N-6-methyltransferase (88268..87531)
ermC (88489..88394)
ermC erm leader peptide protein (23S rRNA methylase leader peptide) (88489..88394)
tnpA (88612..89328)
tnpA transposase of IS26, IS6 family (88612..89328)
repA (89390..90097)
repA replicative Helicase RepA (89390..90097)
repC (89985..90935)
repC replication protein C (89985..90935)
sulII (91243..92058)
sulII dihydropteroate synthase type-2 (91243..92058)
strA (92119..92922)
strA streptomycin 3''-kinase (92119..92922)
strB (92922..93758)
strB streptomycin 3''-phosphotransferase (92922..93758)
tetR (94733..94080)
tetR tetracycline repressor protein class A (94733..94080)
tetA (94737..96011)
tetA tetracycline resistance protein, class A (94737..96011)
pecM (96927..96043)
pecM protein pecM (96927..96043)
tnpA (97476..99020)
tnpA transposase for transposon Tn1721 (fragment) (part 1) (97476..99020)
tnpA (99021..99212)
tnpA transposase for transposon Tn1721 (fragment) (part 2) (99021..99212)
ibfA (101190..99634)
ibfA conserved protein of unknown function, IbfA protein (101190..99634)
ydeA (102045..101455)
ydeA conserved hypothetical protein YdeA (102045..101455)
ydfA (102302..102045)
ydfA conserved hypothetical protein YdfA (102302..102045)
(102691..105900)
conserved membrane protein of unknown function (102691..105900)
(106199..106396)
protein of unknown function (106199..106396)
(106428..107045)
conserved protein of unknown function (106428..107045)
(107766..107077)
conserved protein of unknown function (107766..107077)
(108298..108648)
conserved protein of unknown function (108298..108648)
(108692..109381)
conserved protein of unknown function (108692..109381)
resD (109378..110169)
resD resolvase (Protein D) (109378..110169)
cmi (110254..110307)
cmi colicin-M immunity protein (part1) (110254..110307)
cmi (110307..110699)
cmi colicin-M immunity protein (part2) (110307..110699)
cma (111564..110749)
cma colicin-M (111564..110749)
cbi (111808..112335)
cbi colicin-B immunity protein (111808..112335)
cba (112502..112353)
cba colicin B activity protein (112502..112353)
(112693..112974)
conserved hypothetical protein (112693..112974)
(113556..113281)
conserved protein of unknown function (113556..113281)
insB (113971..114474)
insB transposase InsB IS1 (113971..114474)
ompT (114518..114802)
ompT outer membrane protease (omptin) (fragment) (114518..114802)
hlyF (115235..116344)
hlyF hemolysin HlyF (115235..116344)
mig-14 (116407..117315)
mig-14 Mig-14 protein (116407..117315)
int (117999..118739)
int site-specific recombinase (117999..118739)
repA (120001..119024)
repA RepFIB replication protein RepA (120001..119024)
istA (120747..121103)
istA transposase for insertion sequence element IS21 (120747..121103)
umuC (121418..121750)
umuC DNA polymerase V subunit UmuC, ImpB UV protection protein (fragment) (121418..121750)
insB (122433..121930)
insB transposase InsB IS1 (122433..121930)
sitA (122983..123897)
sitA SitA protein, iron transport protein, periplasmic-binding protein (122983..123897)
sitB (123897..124724)
sitB iron transport protein, ATP-binding component (123897..124724)
sitC (124721..125578)
sitC SitC protein, iron transport protein, inner membrane component (124721..125578)
sitD (125578..126432)
sitD SitD protein, Iron transport protein, inner membrane component (125578..126432)
(127276..127025)
conserved protein of unknown function (127276..127025)
(127446..127640)
hypothetical protein; putative exported protein (127446..127640)
(128195..127716)
conserved hypothetical protein (128195..127716)
(128313..128762)
conserved hypothetical protein (128313..128762)
(128861..129007)
protein of unknown function (128861..129007)
insB (129117..129001)
insB transposase InsB IS1 (part 1) (129117..129001)
insB (129386..129117)
insB transposase InsB IS1 (part 2) (129386..129117)
insA (129702..129427)
insA insA protein, IS1 (129702..129427)
(130178..131680)
conserved hypothetical protein (130178..131680)
insB (132031..132534)
insB transposase InsB IS1 (132031..132534)
sopA (132843..134000)
sopA SopA protein (Plasmid partition protein A) (132843..134000)
sopB (134000..134971)
sopB SopB protein (Plasmid partition protein B) (134000..134971)
(135906..136250)
conserved hypothetical protein yciA (135906..136250)
(136319..136645)
fragment of hypothetical protein (part 1) (136319..136645)
insB (136898..137401)
insB transposase InsB IS1 (136898..137401)
(137419..137670)
fragment of hypothetical protein (part 2) (137419..137670)
(137683..137895)
protein of unknown function (137683..137895)
(139127..138156)
putative transposase IS110 family (139127..138156)
(139449..139279)
hypothetical protein (139449..139279)
yfeB (139529..139954)
yfeB putative antirestriction protein (139529..139954)
(140044..140415)
conserved hypothetical protein (140044..140415)
(140415..140597)
conserved hypothetical protein (140415..140597)
(141591..141821)
conserved protein of unknown function (141591..141821)
ydbA (141894..143234)
ydbA conserved hypothetical protein (141894..143234)
ydcA (143280..143843)
ydcA putative adenine-specific DNA methylase (143280..143843)
ssb (144734..145261)
ssb single-stranded DNA-binding protein (144734..145261)
(145420..146667)
putative phage integrase family protein (145420..146667)
(146654..148192)
putative DNA breaking-rejoining enzyme (146654..148192)
tnp (148337..148663)
tnp transposase ORF A, IS629, IS3 family (148337..148663)
tnp (148663..149550)
tnp transposase ORFB, IS629, IS3 family (148663..149550)
(149629..151575)
putative integrase (149629..151575)
(151562..151987)
conserved protein of unknown function (151562..151987)
(152063..156826)
conserved protein of unknown function (152063..156826)
(158123..157365)
conserved protein of unknown function (158123..157365)
yubL (158551..158784)
yubL conserved hypothetical protein (158551..158784)
parB (158837..160801)
parB putative DNA-binding protein involved in plasmid partitioning (ParB-like partition protein) (158837..160801)
psiB (160856..161290)
psiB plasmid SOS inhibition protein B (160856..161290)
psiA (161287..162006)
psiA plasmid SOS inhibition protein A (161287..162006)
sok (162242..162018)
sok protein Sok (162242..162018)
mok (162228..162440)
mok mok modulator of post-segregation killing protein (162228..162440)
hok (162286..162444)
hok small toxic polypeptide,Hok (162286..162444)
(162834..162758)
Intron_gpII (162834..162758)
(164506..162839)
similar to RNA-directed DNA polymerase (164506..162839)
(164776..164705)
protein of unknown function (164776..164705)