INTEGRALL

The Integron Database

Escherichia coli
Accession Number: KC340960
Source: n.m.
Journal: PLoS ONE 8 (11), E78862 (2013)
Published: 30-NOV-2013
Title: Sequences of Two Related Multiple Antibiotic Resistance Virulence Plasmids Sharing a Unique IS26-Related Molecular Signature Isolated from Different Escherichia coli Pathotypes from Different Hosts
Authors: Venturini,C., Hassan,K.A., Roy Chowdhury,P., Paulsen,I.T., Walker,M.J., Djordjevic,S.P.
Remarks: Class 1 integron. In13
Gene Product Sequence
incRNA (539..612)
repY (626..715)
repY replication protein RepY (626..715)
repZ (703..1575)
repZ replication initiation protein RepZ (703..1575)
hypothetical protein (1925..2053)
hypothetical protein (2270..2437)
stbD (2524..2775)
stbD hypothetical protein (2524..2775)
stbE (2772..3059)
stbE Stability protein (Toxin) (2772..3059)
hypothetical protein (3592..3467)
hypothetical protein (4249..4025)
yafB (4868..4266)
yafB ProQ/FINO family protein (4868..4266)
yagA (5222..5462)
tnpA (8462..5496)
tnpA Tn3 family transposase TnpA (8462..5496)
tnpR (9025..8465)
tnpR transposon Tn21 resolvase TnpR (9025..8465)
tnpM (9735..9151)
tnpM transposition modulator TnpM (9735..9151)
intI1 (10717..9704)
intI1 integrase IntI1 (10717..9704)
dfrA5 (10873..11346)
dfrA5 dihydrofolate reductase type V (10873..11346)
tnpA (12202..11498)
tnpA IS26 transposase TnpA (12202..11498)
res (12362..12604)
blaTEM1 (12787..13647)
blaTEM1 beta-lactamase TEM1 (12787..13647)
tnpB (14024..13884)
tnpA (14233..14949)
tnpA IS26 transposase TnpA (14233..14949)
repA (15011..15718)
repA repA (15011..15718)
repC (15705..16556)
repC replication protein C, RepC (15705..16556)
sul2 (16864..17679)
sul2 dihydropteroate synthase (16864..17679)
strA (17784..18542)
strA aminoglycoside resistance protein A (17784..18542)
strB (18539..19378)
strB aminoglycoside resistance protein B (18539..19378)
tnpA (20155..19439)
tnpA IS26 transposase TnpA (20155..19439)
aphA (20348..21109)
aphA aminoglycoside 3'-phosphotransferase (20348..21109)
tnpA (22003..21299)
tnpA IS26 transposase TnpA (22003..21299)
tniA (23318..22050)
tniA transposase TniA (23318..22050)
urf2 (24100..23393)
urf2 Urf2 (24100..23393)
merE (24333..24097)
merE mercury resistance protein (24333..24097)
merD (24692..24330)
merD transcriptional regulator MerD (24692..24330)
merA (26404..24710)
merA mercuric reductase MerA (26404..24710)
merC (26917..26456)
merC mercury transport protein MerC (26917..26456)
merP (27189..26914)
merP MerP (27189..26914)
merT (27553..27203)
merT mercuric transport protein (27553..27203)
merR (27625..28059)
merR transcriptional regulator MerR (27625..28059)
hypothetical protein (28902..29144)
tetR (29853..29176)
tetR tetracycline repressor protein TetR (29853..29176)
tetA (29857..31131)
tetA tetracycline efflux protein TetA (29857..31131)
pecM (32047..31163)
pecM PecM (32047..31163)
isochorismatase hydrolase (32577..32185)
tnpA (32536..34332)
tnpA TnpA transposase of transposon Tn1721 (32536..34332)
cib (34366..36072)
cim (36437..36090)
cim colicin Ib immunity protein (36437..36090)
hypothetical protein (37084..36923)
hypothetical protein (37702..37523)
parA (38448..37822)
parA Type II plasmid partioning protein (38448..37822)
impB (39923..38652)
impB Error-prone lesion bypass DNA polymerase V ImpB/UmuC (39923..38652)
impA (40360..39923)
impA Error-prone repair protein ImpA/UmuD (40360..39923)
impC (40605..40357)
impC hypothetical protein ImpC (40605..40357)
reverse transcriptase (41628..43352)
hypothetical protein (43429..44331)
hypothetical protein (44608..44483)
methylase (44716..45399)
hypothetical protein (45400..45621)
hypothetical protein (45635..46069)
hypothetical protein (46115..46891)
hypothetical protein (47228..47007)
putative antirestriction protein (47309..47734)
hypothetical protein (47781..48200)
hypothetical protein (48200..48391)
ssb (49160..49687)
ssb single-stranded DNA-binding protein Ssb (49160..49687)
parB (50037..51995)
parB ParB-like partition protein (50037..51995)
psiB (52050..52484)
psiB plasmid SOS inhibition protein B (52050..52484)
psiA (52481..53200)
psiA plasmid SOS inhibition protein A (52481..53200)
entry exclusion protein (53197..53793)
putative antirestriction protein (54022..54756)
hypothetical protein (55487..55921)
conserved hypothetical protein YdfB (55918..56280)
hypothetical protein (56249..56860)
transposase family protein, YhgA-like protein (56857..57783)
YgeA (58286..58035)
conserved hypothetical protein YdiA (58865..59713)
conserved hypothetical protein YggA (60133..59798)
nikA (60366..60698)
nikA NikA (60366..60698)
nikB (60710..63421)
nikB NikB (60710..63421)
hypothetical protein (63753..63920)
hypothetical protein (64179..64018)
hypothetical protein (64601..64308)
trbC (67018..64715)
trbC conjugal transfer protein TrbC (67018..64715)
trbB (68117..66999)
trbB conjugal transfer protein TrbB (68117..66999)
trbA (69403..68114)
trbA conjugal transfer protein, TrbA putative (69403..68114)
neurotensin receptor R8 (70450..70139)
hypothetical protein (70669..70478)
hypothetical protein (71044..70682)
hypothetical protein (71246..71055)
hypothetical protein (71226..71387)
secreted autotransporter serine protease (75713..71550)
nuclease (76510..76043)
hypothetical protein (76669..77292)
hypothetical protein (77854..78003)
membrane-associated, metal-dependent hydrolase (78026..79570)
hypothetical protein (80025..79663)
pndC (80179..80382)
pndC PndC (80179..80382)
pndA (80237..80389)
pndA PndA (80237..80389)
hypothetical protein (80547..80386)
excA (81855..81211)
excA surface exclusion protein ExcA (81855..81211)
traY (84107..81942)
traY conjugative transfer protein TraY (84107..81942)
traX (84644..84180)
traX conjugative transfer protein TraX (84644..84180)
traW (85951..84746)
traW conjugative transfer protein TraW (85951..84746)
traV (86529..85909)
traV conjugative transfer protein TraV (86529..85909)
traU (89573..86529)
traU conjugative transfer protein TraU (89573..86529)
hypothetical protein (90003..90281)
hypothetical protein (90696..90316)
hypothetical protein (91055..90696)
traT (91827..91114)
traT conjugative transfer protein TraT (91827..91114)
traS (92098..91847)
traS conjugative transfer protein TraS (92098..91847)
traR (92553..92155)
traR conjugative transfer protein TraR (92553..92155)
traQ (93129..92602)
traQ conjugative transfer protein TraQ (93129..92602)
traP (93842..93129)
traP conjugative transfer protein TraP (93842..93129)
traO (95170..93839)
traO conjugative transfer protein TraO (95170..93839)
traN (96148..95174)
traN conjugative transfer protein TraN (96148..95174)
traM (96854..96159)
traM conjugative transfer protein TraM (96854..96159)
traL (97216..96866)
traL conjugative transfer protein TraL (97216..96866)
sogL (101249..97233)
sogL DNA primase competative inhibitor SogL (101249..97233)
traK (101603..101313)
traK conjugative transfer protein TraK (101603..101313)
traJ (102748..101600)
traJ ATP-binding protein conjugative transfer TraJ (102748..101600)
traI (103568..102732)
traI conjugative transfer protein TraI (103568..102732)
traH (103882..103565)
traH lipoprotein TraH (103882..103565)
hypothetical protein (104101..103931)
traF (105443..104241)
traF conjugative transfer protein TraF (105443..104241)
traE (106353..105532)
traE conjugative transfer protein TraE (106353..105532)
hypothetical protein (106623..106943)
hypothetical protein (107201..107034)
rci (108535..107366)
rci putative Shufflon-specific DNA recombinase (108535..107366)
pilV (110513..108720)
pilU (111153..110518)
pilU prepilin peptidase PilU (111153..110518)
pilT (111645..111172)
pilT transglycosylase (111645..111172)
pilS (112235..111699)
pilS major pilin subunit PilS (112235..111699)
pilR (113409..112309)
pilR integral membrane protein PilR (113409..112309)
pilQ (114919..113411)
pilQ ATPase (114919..113411)
pilP (115456..115004)
pilP pilus assembly protein PilP (115456..115004)
pilO (116741..115446)
pilO pilin accessory protein PilO (116741..115446)
pilN (118381..116762)
pilM (118849..118412)
pilM conjugative transfer protein PilM (118849..118412)
pilL (119921..118854)
hypothetical protein (120434..120078)
pilI (120772..120530)
pilI conjugative transfer protein PilI (120772..120530)
hypothetical protein YqiK (122547..120853)
hypothetical protein YgiJ (123194..122574)
traC (124126..123461)
traC conjugative transfer protein TraC (124126..123461)
traB (124908..124267)
traB transcription antitermination factor TraB (124908..124267)