INTEGRALL

The Integron Database

Citrobacter freundii
Accession Number: KP975074
Source: Surveillance swab - USA
Journal: Unpublished
Published: 05-JUN-2015
Title: Allelic Variants of blaVIM Reside on Diverse Mobile Genetic Elements in Gram-negative Clinical Isolates from the USA
Authors: McGann,P., Snesrud,E., Ong,A.C., Clifford,R., Kwak,Y.I., Steele,E.D., Rabinowitz,R., Waterman,P.E., Lesho,E.
Remarks: Class 1 integron. In1173
Promoter: PcW
Gene Product Sequence
Transposase (1109..270)
Transposase (1438..1136)
IncF plasmid conjugative transfer pilus assembly protein TraU (2278..1481)
hypothetical protein (2946..2275)
IncF plasmid conjugative transfer pilus assembly protein TraW (4160..2943)
Conjugative signal peptidase TrhF (4701..4171)
Conjugative transfer protein 345 (5015..4698)
IncF plasmid conjugative transfer pilus assembly protein TraC (7477..5030)
Thiol:disulfide involved in conjugative transfer (8181..7474)
Conjugative transfer protein 123 (13861..8330)
Conjugative transfer protein TraA (14445..14062)
Conjugative transfer protein TraV (15036..14458)
IncF plasmid conjugative transfer pilus assembly protein TraB (16349..15033)
IncF plasmid conjugative transfer pilus assembly protein TraK (17263..16346)
IncF plasmid conjugative transfer pilus assembly protein TraE (17873..17247)
IncF plasmid conjugative transfer pilus assembly protein TraL (18073..17870)
hypothetical protein (18661..18296)
hypothetical protein (18816..18673)
hypothetical protein (19659..18997)
hypothetical protein (20036..19659)
hypothetical protein (20206..20391)
Conjugative transfer protein s043 (21131..20502)
Conjugative transfer protein 234 (21672..21088)
IncF plasmid conjugative transfer protein TraD (23542..21683)
Conjugative transfer protein TraI, relaxase (26523..23545)
hypothetical protein (26691..27308)
hypothetical protein (27290..27523)
DNA topoisomerase III (27523..29715)
hypothetical protein (29730..30218)
hypothetical protein (31438..30821)
hypothetical protein (31750..31532)
hypothetical protein (31867..31754)
hypothetical protein (32612..31956)
Type II restriction-modification system methylation subunit (33889..32612)
hypothetical protein (34543..34043)
hypothetical protein (34863..34552)
hypothetical protein (35375..34869)
hypothetical protein (36042..35368)
hypothetical protein (36298..36017)
hypothetical protein (36668..36291)
hypothetical protein (36987..37130)
hypothetical protein (37222..37857)
hypothetical protein (38182..37910)
Chromosome (plasmid) partitioning protein ParB (39412..38231)
Chromosome (plasmid) partitioning protein ParA (40201..39416)
hypothetical protein (40686..40375)
hypothetical protein (41081..40668)
putative DNA methyltransferase (42375..41131)
hypothetical protein (42730..42368)
hypothetical protein (42975..42733)
hypothetical protein (43410..43213)
Phage protein (44348..43410)
hypothetical protein (45010..44465)
hypothetical protein (45372..45013)
hypothetical protein (46145..45594)
hypothetical protein (46578..46150)
hypothetical protein (46922..46575)
hypothetical protein (48067..46934)
hypothetical protein (48306..48112)
hypothetical protein (48747..48355)
hypothetical protein (49081..48752)
Cell division protein FtsH (50700..49237)
hypothetical protein (51706..50774)
hypothetical protein (52765..52268)
hypothetical protein (53256..52768)
hypothetical protein (53353..53688)
hypothetical protein (54173..53703)
hypothetical protein (54537..54166)
hypothetical protein (54742..54548)
hypothetical protein (54993..54742)
hypothetical protein (55631..55083)
hypothetical protein (55794..56144)
Transcriptional regulator, ArsR family (56149..56451)
hypothetical protein (56771..56478)
DNA-binding protein HU-beta (57131..56859)
micrococcal nuclease (SNase-like) (57716..57189)
hypothetical protein (57921..57733)
hypothetical protein (58804..57947)
hypothetical protein (59018..58791)
DNA primase (59539..59021)
hypothetical protein (59982..59536)
hypothetical protein (60341..59982)
hypothetical protein (60826..60398)
Periplasmic thiol:disulfide interchange protein DsbA (61720..60860)
Periplasmic serine proteases (ClpP class) (62695..61736)
hypothetical protein (63549..62695)
hypothetical protein (63847..63554)
hypothetical protein (64331..63858)
hypothetical protein (64949..64428)
hypothetical protein (65473..64952)
hypothetical protein (66086..65478)
hypothetical protein (66355..67470)
hypothetical protein (67488..67922)
hypothetical protein (68173..68009)
plasmid replication protein RepA (70023..68959)
hypothetical protein (70331..70044)
hypothetical protein (70875..70336)
Rod shape determination protein (71374..72357)
hypothetical protein (72374..72667)
hypothetical protein (72669..73088)
Transcriptional activator (73699..73148)
hypothetical protein (74304..73696)
hypothetical protein (74848..74315)
hypothetical protein (75120..74848)
hypothetical protein (75836..76198)
IncF plasmid conjugative transfer protein TraG (79850..76236)
IncF plasmid conjugative transfer pilus assembly protein TraH (81296..79863)
IncF plasmid conjugative transfer pilus assembly protein TraF (82326..81298)
putative DNA helicase (83960..82449)
hypothetical protein (84247..83969)
hypothetical protein (85287..84247)
DNA replication terminus site-binding protein (86315..85440)
hypothetical protein (86465..86596)
hypothetical protein (87133..86642)
DNA polymerase III, epsilon subunit -related 3'-5' exonuclease (87999..87130)
Mobile element protein (89014..88004)
hypothetical protein (89553..89017)
hypothetical protein (89651..89803)
hypothetical protein (90133..89852)
hypothetical protein (90395..90997)
hypothetical protein (91465..91013)
Beta-lactamase (92708..91833)
hypothetical protein (92971..92849)
Mobile element protein (94214..92952)
hypothetical protein (95377..95105)
Putative insecticidal toxin complex (96609..95374)
Mercuric resistance operon regulatory protein (97179..96724)
Mercuric transport protein, MerT (97251..97661)
Periplasmic mercury(+2) binding protein (97677..97952)
Mercuric transport protein, MerC (97980..98405)
Mercuric ion reductase (98444..100138)
Mercuric resistance operon coregulator (100156..100518)
Mercuric transport protein, MerE (100515..100751)
Tn21 protein of unknown function Urf2 (100787..101455)
TniA putative transposase (101530..103209)
TniB NTP-binding protein (103212..103787)
Dihydropteroate synthase (105237..104398)
Ethidium bromide-methyl viologen resistance protein EmrE (105578..105231)
blaVIM-4 (106570..105770)
blaVIM-4 Beta-lactamase (106570..105770)
Beta-lactamase (107652..106684)
blaVIM-4 (107484..106684)
Integron integrase IntIPac (107651..108664)
Mobile element protein (109017..109217)
Transposon Tn21 resolvase (109343..109903)
Mobile element protein (109906..112872)
Mobile element protein (112951..113385)
Mobile element protein (116387..113382)
Mobile element protein (116551..117108)
Beta-lactamase (117291..118151)
Mobile element protein (118323..118910)
hypothetical protein (119051..118929)
hypothetical protein (119361..119245)
YbjA protein (119419..119598)
Chloramphenicol acetyltransferase (120458..119799)
Mobile element protein (120708..120920)
Mobile element protein (120931..121434)
Mobile element protein (122851..122147)
tetracycline repressor protein (124109..123450)
hypothetical protein (124312..124172)
Tetracycline efflux protein TetA (124274..125392)
Type IV secretory pathway, VirB4 component (125576..125448)
Resolvase (125664..125810)
Resolvase (125842..126120)
hypothetical protein (126472..126350)
Mobile element protein (127182..126478)
Mobile element protein (127280..130021)
Mobile element protein (130100..131104)
hypothetical protein (131245..131123)
Putative insecticidal toxin complex (134224..131303)
hypothetical protein (135190..134465)
hypothetical protein (135705..135304)
hypothetical protein (135915..135799)
hypothetical protein (136164..135925)
hypothetical protein (136515..136237)
putative DNA primerase (138229..136502)
hypothetical protein (138523..138407)
hypothetical protein (139046..138900)
hypothetical protein (140102..139251)
hypothetical protein (140734..140177)
hypothetical protein (141026..140808)
hypothetical protein (141309..141040)
Nucleotidase YfbR, HD superfamily (141907..141302)
hypothetical protein (142182..141979)
hypothetical protein (144837..142384)
hypothetical protein (145311..144925)
hypothetical protein (146098..145544)
hypothetical protein (146471..146172)
Type II restriction-modification system methylation subunit (148289..146664)
hypothetical protein (148669..148367)
hypothetical protein (149091..148747)
hypothetical protein (149161..149286)
hypothetical protein (149636..149283)
hypothetical protein (149896..149705)
hypothetical protein (150087..149932)
hypothetical protein (150686..150234)
hypothetical protein (151065..150676)
Ferredoxin (151351..151127)
hypothetical protein (152301..151417)
hypothetical protein (152875..152375)
hypothetical protein (153505..152966)
hypothetical protein (154105..153770)
hypothetical protein (155963..154167)
Cobalamine biosynthesis protein (157325..156048)
hypothetical protein (158535..157525)
Recombination protein BET (159587..158598)
Single-stranded DNA-binding protein (160209..159682)
hypothetical protein (161181..160273)
Aerobic cobaltochelatase CobS subunit (162160..161192)
hypothetical protein (162242..162358)
hypothetical protein (162565..162380)
hypothetical protein (163189..162869)
hypothetical protein (163483..164124)
hypothetical protein (164247..165107)
IncF plasmid conjugative transfer protein TraN (167944..165146)