INTEGRALL

The Integron Database

Escherichia coli
Accession Number: KT988018
Source: dog
Journal: Int. J. Antimicrob. Agents (2016) In press
Published: 02-FEB-2016
Title: Detection of translocatable units in a blaCTX-M-15 extended-spectrum beta-lactamase-producing ST131 Escherichia coli isolate using a hybrid sequencing approach
Authors: Ghosh,H., Doijad,S., Bunk,B., Falgenhauer,L., Yao,Y., Sproeer,C., Gentil,K., Schmiedel,J., Imirzalioglu,C., Overmann,J., Chakraborty,T.
Remarks: Class 1 integron. In54
Promoter: PcH1
Gene Product Sequence
hypothetical protein (101..664)
hypothetical protein (1721..1221)
putative multidrug-efflux transporter/MT1297 (2959..1721)
Phosphotransferase enzyme family protein (3861..2956)
Integrase core domain protein (4687..3983)
Tn3 transposase DDE domain protein (6749..4734)
hypothetical protein (7069..7341)
bla-CTX-M-15 (8263..7388)
bla-CTX-M-15 Beta-lactamase CTX-M-1 precursor (8263..7388)
Integrase core domain protein (8399..9103)
cat (9597..9049)
cat Chloramphenicol acetyltransferase (9597..9049)
blaOXA-1 (10328..9735)
blaOXA-1 Beta-lactamase OXA-1 precursor (10328..9735)
aacA4 (11295..10696)
aacA4 Aminoglycoside N(6')-acetyltransferase type 1 (11295..10696)
Integrase core domain protein (12098..11394)
Tn3 transposase DDE domain protein (12149..13678)
tetR (14671..13994)
tetR Tetracycline repressor protein class A from transposon 1721 (14671..13994)
tetA (14750..15949)
tetA Tetracycline resistance protein, class C (14750..15949)
yedA (16865..15981)
yedA putative inner membrane transporter YedA (16865..15981)
Tn3 transposase DDE domain protein (17330..18175)
pinR (18777..18172)
pinR Putative DNA-invertase from lambdoid prophage Rac (18777..18172)
Tn3 transposase DDE domain protein (18872..21769)
pemK (22238..21906)
pemK mRNA interferase PemK (22238..21906)
pemI (22497..22240)
pemI Antitoxin PemI (22497..22240)
CAAX amino terminal protease self- immunity (23243..22590)
IncFII RepA protein family protein (25039..24182)
Replication regulatory protein RepB (25598..25344)
hypothetical protein (26428..25838)
hha (26675..26466)
hha Hemolysin expression-modulating protein Hha (26675..26466)
nuc (27182..26721)
nuc Thermonuclease precursor (27182..26721)
hypothetical protein (27676..27891)
hypothetical protein (28416..28204)
finO (29105..28545)
finO Fertility inhibition protein (29105..28545)
2,6-dihydropseudooxynicotine hydrolase (30068..29208)
TraX protein (30873..30127)
traI (36163..30893)
traI Multifunctional conjugation protein TraI (36163..30893)
traD (38361..36163)
traD Coupling protein TraD (38361..36163)
hypothetical protein (39149..38412)
ylpA (40083..39352)
ylpA Lipoprotein YlpA precursor (40083..39352)
Plasmid conjugative transfer entry exclusion protein TraS (40611..40132)
hypothetical protein (43455..40633)
Conjugative relaxosome accessory transposon protein (44825..43452)
hypothetical protein (45204..44812)
hypothetical protein (46007..45462)
Type-F conjugative transfer system pilin chaperone (TraQ) (46278..45994)
hypothetical protein (46741..46397)
hypothetical protein (47498..46755)
Conjugal transfer protein TrbE (47748..47491)
conjugal transfer mating pair stabilization protein TraN (49625..47775)
Type-F conjugative transfer system pilin assembly protein (50260..49622)
hypothetical protein (50574..50269)
TraU protein (51596..50604)
Integrase core domain protein (51689..52393)
ltrA (52799..52284)
ltrA Group II intron-encoded protein LtrA (52799..52284)
hypothetical protein (54315..54091)
16S ribosomal RNA methyltransferase KsgA/Dim1 family protein (54878..54315)
hypothetical protein (56286..54925)
hypothetical protein (56568..56338)
hypothetical protein (57794..57603)
hypothetical protein (58213..57791)
klcA (58685..58260)
klcA Antirestriction protein KlcA (58685..58260)
hypothetical protein (59878..59102)
hypothetical protein (60363..59929)
hypothetical protein (60598..60377)
yhdJ (61282..60599)
yhdJ DNA adenine methyltransferase YhdJ (61282..60599)
hypothetical protein (61670..61359)
hypothetical protein (62593..61667)
virB (64407..63436)
virB Virulence regulon transcriptional activator VirB (64407..63436)
soj (65573..64407)
soj Sporulation initiation inhibitor protein Soj (65573..64407)
repE (66916..66161)
repE Replication initiation protein (66916..66161)
xerD1 (68496..67690)
xerD1 Tyrosine recombinase XerD (68496..67690)
ccdB (68802..68497)
ccdB Toxin CcdB (68802..68497)
ccdA (69022..68804)
ccdA Antitoxin CcdA (69022..68804)
hypothetical protein (69568..70080)
hypothetical protein (71235..70114)
Transposase (71327..71752)
IS66 Orf2 like protein (71749..72099)
Transposase IS66 family protein (72130..73743)
hypothetical protein (74727..73954)
hypothetical protein (75240..74740)
vapB1 (75505..75735)
vapB1 Antitoxin VapB (75505..75735)
vapC1 (75732..76148)
vapC1 tRNA(fMet)-specific endonuclease VapC (75732..76148)
hypothetical protein (80017..76193)
hypothetical protein (80193..80041)
vapB2 (80368..80598)
vapB2 Antitoxin VapB (80368..80598)
vapC2 (80595..81011)
vapC2 tRNA(fMet)-specific endonuclease VapC (80595..81011)
recombination protein F (81086..82651)
Viral (Superfamily 1) RNA helicase (82636..83658)
hypothetical protein (84771..85028)
hypothetical protein (85166..84984)
hypothetical protein (85698..86867)
hypothetical protein (87356..87063)
Plasmid stabilization system protein (87737..87462)
Ribbon-helix-helix protein, copG family (88015..87737)
rhmR (88626..89378)
rhmR putative HTH-type transcriptional regulator RhmR (88626..89378)
kdgT (90389..89424)
kdgT 2-keto-3-deoxygluconate permease (90389..89424)
yabJ (90802..90422)
yabJ Enamine/imine deaminase (90802..90422)
yagE (91717..90827)
yagE putative 2-keto-3-deoxy-galactonate aldolase YagE (91717..90827)
ahr (92331..92558)
ahr Aldehyde reductase Ahr (92331..92558)
ugpA (92701..93567)
ugpA sn-glycerol-3-phosphate transport system permease protein UgpA (92701..93567)
lacG (93557..94444)
lacG Lactose transport system permease protein LacG (93557..94444)
cpdA (94455..95279)
cpdA 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA (94455..95279)
ugpC (95285..96358)
ugpC sn-glycerol-3-phosphate import ATP-binding protein UgpC (95285..96358)
ugpB (96351..97661)
ugpB sn-glycerol-3-phosphate-binding periplasmic protein UgpB precursor (96351..97661)
tnpA (98085..97720)
tnpA Transposase for transposon Tn5 (98085..97720)
hypothetical protein (98278..98105)
Integrase core domain protein (98806..98360)
hypothetical protein (99248..98790)
Integrase core domain protein (99581..100285)
agp (100873..100319)
agp Glucose-1-phosphatase precursor (100873..100319)
Sigma-70, region 4 (101480..100995)
resA (101990..101505)
resA Thiol-disulfide oxidoreductase ResA (101990..101505)
lolD (102672..101977)
lolD Lipoprotein-releasing system ATP-binding proteinLolD (102672..101977)
macB1 (103807..102677)
macB1 Macrolide export ATP-binding/permease protein MacB (103807..102677)
macB2 (105080..103797)
macB2 Macrolide export ATP-binding/permease protein MacB (105080..103797)
YHS domain protein (106462..105083)
tpd (107093..106566)
tpd 34 kDa membrane antigen precursor (107093..106566)
efeU (109020..107134)
efeU Ferrous iron permease EfeU precursor (109020..107134)
nqrC (110128..109367)
nqrC Na(+)-translocating NADH-quinone reductase subunit C (110128..109367)
Integrase core domain protein (110408..111112)
bin3 (111332..111003)
bin3 Putative transposon Tn552 DNA-invertase bin3 (111332..111003)
RNase II stability modulator (111910..111458)
xerD2 (113024..112011)
xerD2 Tyrosine recombinase XerD (113024..112011)
dhfrI (113056..113655)
dhfrI Dihydrofolate reductase type 1 (113056..113655)
ant1 (113786..114574)
ant1 Streptomycin 3''-adenylyltransferase (113786..114574)
emrE (114780..115127)
emrE Multidrug transporter EmrE (114780..115127)
folP (115121..115960)
folP Dihydropteroate synthase (115121..115960)
srpC (116447..117652)
srpC putative chromate transport protein (116447..117652)
lineage-specific thermal regulator protein (117663..117968)