INTEGRALL

The Integron Database

Shigella flexneri Y
Accession Number: KY848295
Source: stool - China
Journal: Unpublished
Published: 14-JUN-2017
Title: Emergence of a plasmid-borne mcr-1 gene in a Shigella flexneri isolate from China
Authors: Liang,B.
Remarks: Class 1 integron. In191
Promoter: PcH1
Gene Product Sequence
YbgA (2171..1212)
Transthyretin family protein (2684..2274)
Transcriptional regulator, MerR family, associated with photolyase (3509..2784)
Outer membrane lipoprotein blc precursor (3627..3971)
hypothetical protein (4228..4425)
DNA replication protein (5772..4762)
Chromosome (plasmid) partitioning protein ParA (6513..7679)
Chromosome (plasmid) partitioning protein ParB (7679..8650)
hypothetical protein (9354..9530)
RelE/StbE replicon stabilization toxin (9989..9684)
RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) (10294..10043)
Error-prone, lesion bypass DNA polymerase V (UmuC) (11644..10373)
Error-prone repair protein UmuD (12069..11644)
Mobile element protein (12170..13228)
Mobile element protein (13244..13390)
hypothetical protein (13754..13590)
antirestriction protein (13845..14810)
hypothetical protein (15036..15158)
antirestriction protein (15290..15721)
Plasmid conjugative transfer endonuclease (16280..15753)
TriL protein (17019..16273)
MobB protein (18941..17034)
DNA-binding protein H-NS (20042..19650)
DNA topoisomerase III (22240..20039)
hypothetical protein (22545..22237)
hypothetical protein (22856..22521)
IncN plasmid KikA protein (23200..22883)
hypothetical protein (23181..23300)
hypothetical protein (23689..23291)
ATPase (24728..23679)
Inner membrane protein of type IV secretion of T-DNA complex, TonB-like, VirB10 (25928..24732)
Outer membrane and periplasm component of type IV secretion of T-DNA complex (26818..25925)
Inner membrane protein forms channel for type IV secretion of T-DNA complex, VirB8 (27497..26811)
hypothetical protein (27630..27490)
Inner membrane protein of type IV secretion of T-DNA complex, VirB6 (28714..27707)
IncQ plasmid conjugative transfer protein TraG (29016..28732)
Minor pilin of type IV secretion complex, VirB5 (29744..29028)
ATPase required for both assembly of type IV secretion complex and secretion of T-DNA complex, VirB4 (32513..29763)
Major pilus subunit of type IV secretion complex, VirB2 (32822..32523)
Peptidoglycan hydrolase VirB1, involved in T-DNA transfer (33495..32833)
hypothetical protein (33713..33498)
hypothetical protein (34014..33706)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain (34328..35242)
hypothetical protein (35246..36229)
hypothetical protein (36222..36710)
sensor histidine kinase/response regulator (36707..38425)
Mobile element protein (39436..39272)
Mobile element protein (39641..39456)
integrase/recombinase (39833..40810)
Mobile element protein (42892..41156)
nicotinamidase-related amidase (42896..43303)
Permease of the drug/metabolite transporter (DMT) superfamily (43441..44325)
Tetracycline efflux protein TetA (45556..44357)
Transcriptional regulator, TetR family (45635..46312)
Relaxase /helicase (46586..46344)
Mobile element protein (48209..46644)
Mobile element protein (48953..48249)
hypothetical protein (50290..49217)
hypothetical protein (50483..50334)
RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) (50825..51064)
RelE/StbE replicon stabilization toxin (51064..51258)
hypothetical protein (51315..51905)
Resolvase (52042..52614)
hypothetical protein (52651..54042)
DNA-invertase (54066..54503)
Qnr (55478..54822)
Mobile element protein (55846..56037)
Mobile element protein (56077..56241)
Mobile element protein (56370..56906)
Mobile element protein (59936..56931)
Mobile element protein (60100..60657)
Beta-lactamase (60840..61700)
hypothetical protein (62263..62123)
Aminoglycoside 3'-phosphotransferase 2 (63257..62421)
Aminoglycoside 3'-phosphotransferase (64060..63257)
Dihydropteroate synthase (64936..64121)
hypothetical protein (65267..65124)
hypothetical protein (65266..65442)
Mobile element protein (66628..65624)
Mobile element protein (68485..66707)
Mobile element protein (69229..68525)
Dihydrofolate reductase (69949..69476)
Integron integrase IntIPac (70105..71118)
hypothetical protein (71256..71077)
DNA-invertase (71511..72080)
hypothetical protein (72077..72229)
hypothetical protein (72463..72236)
hypothetical protein (72833..72432)
hypothetical protein (72818..74152)
Mobile element protein (74442..75146)