INTEGRALL

The Integron Database

Escherichia coli
Accession Number: LS992182
Source: n.m.
Journal: Submitted (15-AUG-2018) Leibniz-Institut DSMZ-Deutsche Sammlung von Mikro, Mikrobielle Genomforschung, Inhoffenstrasse 7 B, 38124, Germany
Published: 29-JAN-2019
Title: Direct Submission
Authors: Gonzaga-Molto,A.
Remarks: Class 1 integron. In54
Promoter: PcH1
Gene Product Sequence
traI_2 (192..458)
traI_2 Multifunctional conjugation protein TraI (192..458)
traI_3 (475..1455)
traI_3 Multifunctional conjugation protein TraI (475..1455)
traI_4 (1416..3467)
traI_4 Multifunctional conjugation protein TraI (1416..3467)
(3487..4233)
conjugal transfer pilus acetylation protein TraX (3487..4233)
(4292..5152)
2,6-dihydropseudooxynicotine hydrolase (4292..5152)
finO_2 (5255..5815)
finO_2 Conjugal transfer repressor (5255..5815)
(6436..6711)
Transposase (6436..6711)
(6756..7133)
IS1 transposase (6756..7133)
yhcR_1 (7178..7639)
yhcR_1 Endonuclease YhcR precursor (7178..7639)
hha_2 (7685..7894)
hha_2 Hemolysin expression-modulating protein Hha (7685..7894)
(7932..8522)
Uncharacterised protein (7932..8522)
(8762..9016)
replication protein (8762..9016)
(9236..9146)
CopA (9236..9146)
(9321..10178)
replication protein (9321..10178)
(11117..11770)
CAAX amino terminal protease self- immunity (11117..11770)
pemI (11863..12120)
pemI Antitoxin PemI (11863..12120)
pemK (12122..12454)
pemK mRNA interferase PemK (12122..12454)
(15488..12591)
Transposase, TnpA family (15488..12591)
pinR (15583..16188)
pinR Putative DNA-invertase from lambdoid prophage Rac (15583..16188)
(17006..16185)
Transposase, TnpA family (17006..16185)
yedA_2 (17495..18379)
yedA_2 putative inner membrane transporter YedA (17495..18379)
tetA_2 (19610..18411)
tetA_2 Tetracycline resistance protein, class C (19610..18411)
tetR (19689..20366)
tetR Tetracycline repressor protein class A from transposon 1721 (19689..20366)
(22211..20682)
Transposase, TnpA family (22211..20682)
(22262..22966)
Integrase core domain protein (22262..22966)
aacA4 (23065..23664)
aacA4 Aminoglycoside N(6')-acetyltransferase type 1 (23065..23664)
bla_1 (23750..24625)
bla_1 Beta-lactamase OXA-1 precursor (23750..24625)
cat (24763..25311)
cat Chloramphenicol acetyltransferase (24763..25311)
(25961..25257)
Integrase core domain protein (25961..25257)
(28023..26008)
Transposase, TnpA family (28023..26008)
(28343..28615)
Uncharacterised protein (28343..28615)
bla_2 (29537..28662)
bla_2 Beta-lactamase CTX-M-1 precursor (29537..28662)
bla_2 putative signal peptide (29537..29509)
(29673..30377)
Integrase core domain protein (29673..30377)
bin3 (30597..30268)
bin3 Putative transposon Tn552 DNA-invertase bin3 (30597..30268)
(30923..30723)
Uncharacterised protein (30923..30723)
xerD_6 (32289..31276)
xerD_6 Tyrosine recombinase XerD (32289..31276)
dhfrI (32447..32920)
dhfrI Dihydrofolate reductase type 1 (32447..32920)
ant1 (33051..33839)
ant1 Streptomycin 3''-adenylyltransferase (33051..33839)
emrE_2 (34045..34392)
emrE_2 Methyl viologen resistance protein C (34045..34392)
folP_2 (34386..35225)
folP_2 Dihydropteroate synthase (34386..35225)
(35353..35556)
Uncharacterised protein (35353..35556)
srpC (35712..36917)
srpC putative chromate transport protein (35712..36917)
(36928..37233)
lineage-specific thermal regulator protein (36928..37233)
(37460..38224)
Integrase core domain protein (37460..38224)
(39301..38717)
Uncharacterised protein (39301..38717)
(40539..39301)
putative multidrug-efflux transporterc/MT1297 (40539..39301)
(41441..40536)
Aminoglycoside phosphotransferase (41441..40536)
(42267..41563)
Integrase core domain protein (42267..41563)
nqrC_2 (42547..43308)
nqrC_2 Na(+)-translocating NADH-quinone reductase subunit C (42547..43308)
efeU_3 (43601..45541)
efeU_3 Ferrous iron uptake protein (43601..45541)
tpd_2 (45582..46109)
tpd_2 Pathogen-specific membrane antigen (45582..46109)
tpd_2 putative signal peptide (45582..45606)
(46213..47592)
putative membrane protein (46213..47592)
macB_4 (47595..48878)
macB_4 Macrolide export ATP-binding/permease protein MacB (47595..48878)
macB_5 (48868..49998)
macB_5 Macrolide export ATP-binding/permease protein MacB (48868..49998)
lolD_4 (50003..50698)
lolD_4 Lipoprotein-releasing system ATP-binding protein LolD (50003..50698)
resA_2 (50685..51170)
resA_2 Thiol-disulfide oxidoreductase ResA (50685..51170)
(51195..51680)
Sigma-70, region 4 (51195..51680)
agp_3 (51802..52356)
agp_3 Glucose-1-phosphatase precursor (51802..52356)
agp_3 putative signal peptide (51802..51824)
(53094..52390)
Integrase core domain protein (53094..52390)
(53382..53498)
ALIL (53382..53498)
(53427..53885)
putative transposase OrfB (53427..53885)
(53869..54315)
putative transposase OrfB (53869..54315)
(54397..54570)
Transposase, TnpA family (54397..54570)
tnpA_4 (54662..54955)
tnpA_4 Transposase for transposon Tn5 (54662..54955)
ugpB_2 (56324..55014)
ugpB_2 sn-glycerol-3-phosphate-binding periplasmic protein UgpB precursor (56324..55014)
ugpB_2 putative signal peptide (56324..56302)
ugpC_3 (57390..56317)
ugpC_3 sn-glycerol-3-phosphate import ATP-binding protein UgpC (57390..56317)
cpdA_2 (58220..57396)
cpdA_2 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA (58220..57396)
lacG_2 (59118..58231)
lacG_2 Lactose transport system permease protein LacG (59118..58231)
ugpA_2 (59974..59108)
ugpA_2 sn-glycerol-3-phosphate transport system permease protein UgpA (59974..59108)
adh (60344..60117)
adh Alcohol dehydrogenase (60344..60117)
yagE_3 (60958..61848)
yagE_3 putative 2-keto-3-deoxy-galactonate aldolase YagE (60958..61848)
yabJ_2 (61873..62253)
yabJ_2 Enamine/imine deaminase (61873..62253)
kdgT_2 (62328..63251)
kdgT_2 2-keto-3-deoxygluconate permease (62328..63251)
rhmR_3 (64049..63297)
rhmR_3 putative HTH-type transcriptional regulator RhmR (64049..63297)
(64660..64938)
Ribbon-helix-helix protein, copG family (64660..64938)
(64938..65213)
Plasmid stabilisation system protein (64938..65213)
(65319..65612)
Uncharacterised protein (65319..65612)
(66977..65808)
Uncharacterised protein (66977..65808)
(67509..67691)
putative addiction module antidote protein, family (67509..67691)
(67904..67647)
Uncharacterised protein (67904..67647)
(68066..68341)
Transposase (68066..68341)
(68386..68763)
IS1 transposase (68386..68763)
(70039..69017)
Viral (Superfamily 1) RNA helicase (70039..69017)
(71589..70024)
recombination protein F (71589..70024)
vapC_1 (72080..71664)
vapC_1 tRNA(fMet)-specific endonuclease VapC (72080..71664)
vapB_1 (72307..72077)
vapB_1 Antitoxin VapB (72307..72077)
(72658..76482)
Uncharacterised protein (72658..76482)
vapC_2 (76943..76527)
vapC_2 tRNA(fMet)-specific endonuclease VapC (76943..76527)
vapB_2 (77170..76940)
vapB_2 Antitoxin VapB (77170..76940)
(77435..77935)
Uncharacterised protein (77435..77935)
(77948..78721)
Uncharacterised protein (77948..78721)
(80545..78932)
Transposase (80545..78932)
(80926..80576)
Transposase (80926..80576)
(81348..80923)
Transposase (81348..80923)
(81440..82561)
Uncharacterised protein (81440..82561)
(83107..82595)
Uncharacterised protein (83107..82595)
(83653..83871)
plasmid maintenance protein CcdA (83653..83871)
(83873..84178)
plasmid maintenance protein CcdB (83873..84178)
xerD_7 (84179..84985)
xerD_7 Tyrosine recombinase XerD (84179..84985)
(85759..86514)
replication protein (85759..86514)
soj (87102..88268)
soj Sporulation initiation inhibitor protein soj (87102..88268)
sopB_2 (88268..89239)
sopB_2 Plasmid partition protein B (88268..89239)
(90082..91008)
Uncharacterised protein (90082..91008)
yhdJ_4 (91393..92076)
yhdJ_4 DNA adenine methyltransferase YhdJ (91393..92076)
(92077..92298)
Uncharacterised protein (92077..92298)
(92312..92746)
Uncharacterised protein (92312..92746)
(92746..93573)
Uncharacterised protein (92746..93573)
klcA_6 (93990..94415)
klcA_6 Antirestriction protein KlcA (93990..94415)
(94462..94884)
Uncharacterised protein (94462..94884)
(94881..95072)
Uncharacterised protein (94881..95072)
(96107..96337)
Uncharacterised protein (96107..96337)
(96389..97750)
Uncharacterised protein (96389..97750)
(97797..98360)
16S ribosomal RNA methyltransferase KsgA/Dim1 family protein (97797..98360)
(98360..98584)
Uncharacterised protein (98360..98584)
ltrA_5 (99876..100517)
ltrA_5 Group II intron-encoded protein LtrA (99876..100517)
(101112..100408)
Integrase core domain protein (101112..100408)
(101216..102016)
conjugal transfer pilus assembly protein TraU (101216..102016)
(102046..102351)
Uncharacterised protein (102046..102351)
(102360..102998)
conjugal transfer pilus assembly protein TrbC (102360..102998)
putative signal peptide (102360..102381)
(102995..104845)
conjugal transfer mating pair stabilization protein TraN (102995..104845)
putative signal peptide (102995..103013)
(104872..105129)
conjugal transfer protein TrbE (104872..105129)
(105122..105865)
conjugal pilus assembly protein TraF (105122..105865)
putative signal peptide (105122..105141)
(105879..106223)
conjugal transfer protein TrbA (105879..106223)
(106342..106626)
conjugal transfer pilin chaperone TraQ (106342..106626)
(106613..107158)
conjugal transfer protein TrbB (106613..107158)
(107416..107808)
conjugal transfer protein TrbF (107416..107808)
(107795..109168)
conjugal transfer pilus assembly protein TraH (107795..109168)
(109165..111987)
conjugal transfer mating pair stabilization protein TraG (109165..111987)
(112009..112488)
Plasmid conjugative transfer entry exclusion protein TraS (112009..112488)
ylpA_2 (112537..113268)
ylpA_2 Lipoprotein YlpA precursor (112537..113268)
ylpA_2 putative signal peptide (112537..112556)
(113471..114208)
Uncharacterised protein (113471..114208)
(115848..114277)
Transposase (115848..114277)
(116215..115868)
Transposase (116215..115868)
(116862..116215)
IS2 repressor TnpA (116862..116215)
traD_2 (116966..119173)
traD_2 DNA transport protein TraD (116966..119173)
traI_5 (119173..124443)
traI_5 Multifunctional conjugation protein TraI (119173..124443)
(124463..125209)
conjugal transfer pilus acetylation protein TraX (124463..125209)
(125268..126128)
2,6-dihydropseudooxynicotine hydrolase (125268..126128)
finO_3 (126231..126791)
finO_3 Conjugal transfer repressor (126231..126791)
(126920..127177)
Uncharacterised protein (126920..127177)
(127411..127686)
Transposase (127411..127686)
(127731..128108)
IS1 transposase (127731..128108)
yhcR_2 (128153..128614)
yhcR_2 Endonuclease YhcR precursor (128153..128614)
hha_3 (128659..128868)
hha_3 Hemolysin expression-modulating protein Hha (128659..128868)
(128906..129496)
Uncharacterised protein (128906..129496)
(129736..129990)
replication protein (129736..129990)
(130210..130120)
CopA (130210..130120)
(130295..130933)
replication protein (130295..130933)
(131300..130743)
Uncharacterised protein (131300..130743)
(131853..132095)
Uncharacterised protein (131853..132095)
(132092..132289)
Uncharacterised protein (132092..132289)