INTEGRALL

The Integron Database

Escherichia coli
Accession Number: LT985231
Source: n.m.
Journal: Submitted (12-FEB-2018) Genoscope CEA, 2 rue Gaston Cremieux CP5706 91057 Evry cedex, France, France
Published: 15-MAR-2018
Title: Direct Submission
Authors: Cea,G.-C., William,W.
Remarks: Class 1 integron. In641
Promoter: PcH1
Gene Product Sequence
(363..293)
IncRNA (363..293)
repY (378..467)
repY regulator of repZ expression (378..467)
repZ (410..1486)
repZ replication initiation protein (Replication-associated protein) (410..1486)
(2420..3073)
CAAX amino terminal protease, Tir protein (2420..3073)
pemI (3166..3423)
pemI Plasmid stable inheritance repressor protein, antitoxin PemI (3166..3423)
pemK (3425..3757)
pemK mRNA interferase PemK (endoribonuclease) (3425..3757)
(4042..5352)
Conserved protein of unknown function YjcA protein (4042..5352)
insA (5381..5656)
insA transposase InsA of IS1 (5381..5656)
insB (5575..6078)
insB transposase InsB of IS1 (5575..6078)
merR (6619..6185)
merR Mercuric resistance operon regulatory protein MerR (6619..6185)
tnpA (9948..6814)
tnpA Transposon Tn2 transposase (9948..6814)
tnpR (9983..10540)
tnpR Transposon resolvase of Tn2 (9983..10540)
(10559..10813)
(10959..11822)
conserved protein of unknown function (putative oxidoreductase) (10959..11822)
(11860..12105)
conserved protein of unknown function (11860..12105)
(12235..12483)
conserved protein of unknown function (12235..12483)
sul3 (12574..13365)
sul3 Dihydropteroate synthase type-3 (12574..13365)
tnpA (13612..14298)
tnpA IS440 transposase (13612..14298)
qacEdelta1 (14877..14545)
qacEdelta1 Quaternary ammonium compound-resistance protein QacI (14877..14545)
aadA1 (15838..15047)
aadA1 Streptomycin 3''-adenylyltransferase (AadA1) (15838..15047)
cmlA1 (17190..15931)
cmlA1 Chloramphenicol resistance efflux protein (17190..15931)
aadA2 (18255..17452)
aadA2 Streptomycin 3''-adenylyltransferase (AadA2) (18255..17452)
(18909..18301)
conserved protein of unknown function (18909..18301)
(19931..19005)
putative esterase/hydrolase EstX (19931..19005)
intI1 (20014..20943)
tnpA IS26 (21593..20889)
tnpA IS26 transposase of IS26, IS6 family (21593..20889)
blaSHV-12 (21730..22590)
blaSHV-12 Beta-lactamase SHV-12 (21730..22590)
ygbI (23372..22611)
ygbI Transcriptional regulator, DeoR family (23372..22611)
mcp (25277..23700)
mcp Methyl-accepting chemotaxis protein (25277..23700)
tnpR (25537..26097)
tnpR transposon Tn21 resolvase (25537..26097)
tnpA (26100..29066)
tnpA transposon Tn21 transposase (26100..29066)
tnpAIS4321R (29145..30149)
tnpAIS4321R IS4321R transposase (29145..30149)
(30435..30818)
Conserved hypothetical protein YadA (30435..30818)
(31564..31295)
Conserved hypothetical protein YaeB (31564..31295)
(32055..31561)
conserved hypothetical protein YafA (32055..31561)
(32674..32111)
conserved hypothetical protein YafB (32674..32111)
(33066..34412)
conserved protein of unknown function (33066..34412)
cib (34691..36571)
cib Colicin-Ib (34691..36571)
ybaA (37055..37402)
ybaA conserved hypothetical protein YbaA (37055..37402)
ydeA (38010..37420)
ydeA conserved protein of unknown function YdeA (38010..37420)
(38267..38007)
conserved hypothetical protein (38267..38007)
yedA (38836..39249)
yedA conserved hypothetical protein (38836..39249)
resD (39251..40036)
resD resolvase protein ResD (39251..40036)
(40620..41252)
Putative plasmid partition protein ParA (40620..41252)
(41252..41626)
conserved protein of unknown function (41252..41626)
stbA (41865..42839)
stbA StbA stable plasmid inheritance protein A (ParM family) (41865..42839)
stbB (42843..43235)
stbB plasmid stability protein StbB (42843..43235)
ImpC (43498..43319)
(43668..43495)
conserved protein of unknown function (43668..43495)
(43892..44818)
conserved hypothetical protein (43892..44818)
YfbB (45203..45886)
YfbB Site-specific DNA-methyltransferase (45203..45886)
(45887..46108)
conserved protein of unknown function (45887..46108)
yfcB (46120..46554)
yfcB conserved hypothetical protein (46120..46554)
yfdA (46554..47375)
yfdA conserved hypothetical protein (46554..47375)
ardB (47793..48218)
ardB Antirestriction protein ArdB (47793..48218)
(48265..48687)
conserved hypothetical protein (48265..48687)
(48684..48875)
conserved hypothetical protein (48684..48875)
ssb (49645..50172)
ssb single-stranded DNA-binding protein (49645..50172)
(50230..50463)
conserved hypothetical protein (50230..50463)
yfhA (50432..52480)
yfhA DNA-binding protein involved in plasmid partitioning (ParB-like partition protein) (50432..52480)
psiB (52532..52969)
psiB Plasmid SOS inhibition protein B (52532..52969)
psiA (52966..53685)
psiA Plasmid SOS inhibition protein A (52966..53685)
(53809..54990)
putative transposase (53809..54990)
ardA (55437..55937)
ardA antirestriction protein ArdA (55437..55937)
(56666..57100)
conserved protein of unknown function (56666..57100)
(57194..57460)
conserved protein of unknown function (57194..57460)
ygdB (57525..58427)
ygdB putative transposase YgdB (57525..58427)
(58427..58720)
conserved hypothetical protein (58427..58720)
ygeA (59002..58751)
ygeA conserved hypothetical protein containing putative lambda repressor-like DNA-binding domain (59002..58751)
ygfB (59580..60431)
ygfB conserved hypothetical protein (59580..60431)
yggA (60852..60517)
yggA conserved hypothetical protein (60852..60517)
nikA (61086..61418)
nikA Relaxosome component protein NikA; ribbon-helix-helix protein, CopG family (61086..61418)
nikB (61429..64128)
nikB IncI1 plasmid relaxase/mobilization protein NikB (61429..64128)
trbC (66457..64166)
trbC IncI1 plasmid conjugative transfer protein TrbC (66457..64166)
trbB (67520..66450)
trbB IncI1 plasmid conjugative transfer protein TrbB, Protein-disulfide isomerase (67520..66450)
trbA (68747..67539)
trbA IncI1 plasmid conjugative transfer protein TrbA (68747..67539)
pndC (68981..69184)
pndC post-segregational killing protein PndC (68981..69184)
pndA (69039..69191)
pndA post-segregational killing protein PndA (69039..69191)
(69514..69263)
conserved protein of unknown function (69514..69263)
(70614..70438)
conserved hypothetical protein (70614..70438)
(71013..70843)
protein of unknown function (71013..70843)
(71006..71215)
conserved protein of unknown function (71006..71215)
excAB (71949..71287)
excAB Exclusion-determining proteins A and B (71949..71287)
traY (74176..72014)
traY Conserved membrane protein; IncI1 plasmid conjugative transfer protein TraY (74176..72014)
traX (74857..74273)
traX Conserved protein of unknown function; IncI1 conjugative transfer protein TraX (74857..74273)
traW (76088..74886)
traW Conserved protein of unknown function; IncI1 plasmid conjugative transfer protein TraW; putative Lipoprotein (76088..74886)
traV (76669..76055)
traV Conserved hypothetical protein; IncI1 plasmid conjugative transfer protein TraV (76669..76055)
traU (79806..76669)
traU IncI1 plasmid conjugative transfer protein TraU; putative major AAA+ motor ATPase (79806..76669)
traT (80603..79803)
traT Conserved protein of unknown function; IncI1 plasmid conjugative transfer protein TraT (80603..79803)
(80775..80587)
Conserved protein of unknown function; IncI1 plasmid conjugative transfer protein TraS (80775..80587)
traR (81243..80839)
traR Conserved membrane protein of unknown function; IncI1 plasmid conjugative transfer protein TraR (81243..80839)
traQ (81818..81294)
traQ conserved inner membrane protein of unknown function; IncI1 plasmid conjugative transfer protein traQ (81818..81294)
traP (82522..81818)
traP Conserved protein of unknown function; IncI1 conjugative transfer protein TraP (82522..81818)
traO (83811..82522)
traO Conserved protein of unknown function; IncI1 plasmid conjugative transfer protein TraO (83811..82522)
traN (84797..83814)
traN Conserved protein of unknown function; IncI1 plasmid conjugative transfer protein TraN (84797..83814)
traM (85500..84808)
traM Conserved protein of unknown function; IncI1 plasmid conjugative transfer protein TraM (85500..84808)
traL (85844..85497)
traL IncI1 plasmid conjugative transfer protein TraL (85844..85497)
sogLS (89629..85862)
sogLS SogL DNA primase (89629..85862)
(90270..89719)
putative EDTA-resistant nuclease (Nuc) (90270..89719)
traJ (91720..90572)
traJ IncI1 plasmid conjugative transfer protein TraJ, putative ATPase (91720..90572)
traI (92535..91717)
traI conserved hypothetical protein, IncI1 plasmid conjugative transfer protein TraI, putative Lipoprotein (92535..91717)
traH (92990..92532)
traH IncI1 plasmid conjugative transfer protein TraH, putative lipoprotein (92990..92532)
traG (93966..93385)
traG IncI1 plasmid conjugative protein TraG predicted phosphatase (93966..93385)
traF (95231..94029)
traF conserved hypothetical protein, IncI1 plasmid conjugative transfer protein TraF (95231..94029)
traE (96140..95316)
traE Conserved protein of unknown function; IncI1 plasmid conjugative transfer protein TraE (96140..95316)
rci (97445..96291)
rci Shufflon-specific DNA recombinase (97445..96291)
pilVB (97510..97755)
pilVB' (98008..97757)
pilVA (98043..98384)
pilVA (99673..98381)
pilU (100329..99673)
pilU Prepilin peptidase PilU, peptidase A24 family protein (100329..99673)
pilT (100874..100314)
pilT Lytic transglycosylase PilT (100874..100314)
pilS (101498..100884)
pilS Type IV prepilin PilS (101498..100884)
PilR (102613..101516)
PilR IncI1 conjugative transfer protein PilR Type IV pilus biogenesis protein (102613..101516)
pilQ (104179..102626)
pilQ IncI1 conjugative transfer ATPase PilQ (104179..102626)
pilP (104642..104190)
pilP IncI1 conjugal transfer pilus assembly protein PilP (104642..104190)
pilO (105924..104629)
pilO IncI1 conjugal transfer pilus assembly protein PilO Type IV pilus biogenesis protein (105924..104629)
pilN (107599..105917)
pilN IncI1 conjugative transfer protein PilN Type IV pilus outer membrane secretin (107599..105917)
pilM (108050..107613)
pilM IncI1 conjugal transfer protein PilM type IV pilus biogenenesis (108050..107613)
pilL (109117..108050)
pilL IncI1 plasmid conjugative transfer Lipoprotein PilL (109117..108050)
(109741..109151)
Conserved protein of unknown function PilK (109741..109151)
(110243..109791)
Conserved protein of unknown function PilJ (110243..109791)
(110540..110286)
Conserved protein of unknown function PilI (110540..110286)
traD (111374..110808)
traD Conserved protein of unknown function TraD (conjugal transfer) (111374..110808)
traC (112071..111388)
traC IncI1 plasmid conjugative transfer protein TraC (112071..111388)
(112174..112353)
conserved protein of unknown function (112174..112353)
traB (112858..112325)
traB IncI1 plasmid conjugative transfer NusG putative transcription antiterminator TraB (112858..112325)
(113587..113300)
Putative IncI1 conjugal transfer protein TraA putative response regulator (113587..113300)
(113768..113505)
conserved exported protein of unknown function (113768..113505)