INTEGRALL

The Integron Database

Escherichia coli
Accession Number: MF152729
Source: n.m.
Journal: Unpublished
Published: 25-MAY-2018
Title: A longitudinal study on the carriage and maintenance of blaCTXM-1 encoding ceftiofur resistant E. coli in an Australian herd of pigs
Authors: Abraham,S., Kirkwood,R., Saputhra,S., Laird,T., Mitchell,T., Sing,M., Linn,B., Mukerji,S., Abraham,R., Trott,D.J., O'Dea,M.A.
Remarks: Class 1 integron. In54
Promoter: PcH1
Gene Product Sequence
replication initiation protein, repZ (1..1077)
Mobile element protein (3306..2098)
Mobile element protein (6050..3579)
Mobile element protein (6614..6054)
Mobile element protein (7188..6790)
Integron integrase IntI1 (8356..7343)
Dihydrofolate reductase dfrA17 (8856..8987)
aadA5 (9118..9906)
tnpA IS26 (10108..10812)
Mobile element protein (10931..11620)
Mobile element protein (13369..12161)
Dihydropteroate synthase (14021..14836)
Phosphoglucosamine mutase (14922..15224)
Mobile element protein (16536..15400)
Prevent host death protein, Phd antitoxin YacA (16903..17172)
YacB (17169..17450)
hypothetical protein (17490..18338)
YadA (18455..18928)
YaeA (19063..19296)
hypothetical protein (19674..19405)
hypothetical protein (20204..19671)
Colicin Ib protein (22797..24677)
Colicin Ib immunity protein (25042..24695)
YdeA protein (26116..25526)
YdfA protein (26373..26116)
IbfC (28579..28433)
YbeA protein (28767..28976)
YbeB protein (29107..29988)
YedA (30460..30912)
Resolvase resD (30914..31693)
YefA protein (31873..32517)
(32604..32912)
YbiA protein (32604..32912)
(34298..34714)
parB protein (34298..34714)
(35990..34716)
DNA polymerase V subunit impB (35990..34716)
(36427..35990)
DNA polymerase V subunit impA (36427..35990)
(36672..36424)
hypothetical protein (36672..36424)
(37988..38299)
hypothetical protein (37988..38299)
(38375..39058)
hypothetical protein (38375..39058)
(39059..39280)
yfcA protein (39059..39280)
(39292..39726)
DUF1380 family protein yfcB (39292..39726)
yfdA protein (39726..40547)
(40522..40992)
DUF1472 family protein (40522..40992)
(40965..41390)
yfeB protein (40965..41390)
yfeC protein (41437..41859)
(41856..42047)
yffA protein (41856..42047)
(42816..43343)
Single-stranded DNA-binding protein (42816..43343)
Putative cytoplasmic protein (43401..43634)
yfhA protein (43693..45651)
(45706..46140)
psiB protein (45706..46140)
(46852..47448)
ygaA protein (46852..47448)
(47520..47990)
DUF1472 family protein (47520..47990)
(49138..49572)
ygcA protein (49138..49572)
(49664..49930)
ygdA protein (49664..49930)
(49995..50936)
ygdB protein (49995..50936)
(51450..51199)
ygeA hypothetical protein (51450..51199)
ygfB protein (52029..52877)
(53297..52962)
yggA protein (53297..52962)
Nickel ABC transporter nikA (53483..53863)
hypothetical protein (53874..56573)
trbC protein (58901..56610)
trbA (61190..59982)
pndA post-segregation killing protein (61479..61634)
IncI1 plasmid conjugative transfer protein (68261..67059)
IncI1 plasmid conjugative transfer protein (68842..68228)
(72774..71974)
IncI1 plasmid conjugative transfer protein (72774..71974)
(72946..72758)
IncI1 plasmid conjugative transfer protein (72946..72758)
(73991..73464)
IncI1 plasmid conjugative transfer protein (73991..73464)
IncI1 plasmid conjugative transfer protein (75983..74694)
(77671..76979)
IncI1 plasmid conjugative transfer protein (77671..76979)
(78015..77668)
IncI1 plasmid conjugative transfer protein (78015..77668)
(82429..81878)
Nuc Plasmid conjugative transfer endonuclease (82429..81878)
IncI1 plasmid conjugative transfer protein (82734..82444)
(83879..82731)
IncI1 plasmid conjugative transfer protein (83879..82731)
(85148..84690)
IncI1 plasmid conjugative transfer protein (85148..84690)
(86127..85543)
IncI1 plasmid conjugative transfer protein (86127..85543)
(87386..86184)
IncI1 plasmid conjugative transfer protein (87386..86184)
Shufflon-specific DNA recombinase (89629..88442)
Mobile element protein (90389..91651)
Beta-lactamase CTX-M-1 (91939..92814)
Tryptophan synthase beta chain like (93133..92861)
Type-IV sectretion leader peptidase pilU (95883..95278)
(96478..95918)
IncI1 plasmid conjugative transfer putative membrane protein (96478..95918)
IncI1 plasmid conjugative transfer prepilin (97102..96488)
(99782..98229)
IncI1 plasmid conjugative transfer ATPase (99782..98229)
IncI1 plasmid pilus assembly protein (100245..99793)
IncI1 plasmid conjugative transfer protein (103649..103212)
IncI1 plasmid conjugative transfer protein (105341..104748)
IncI1 plasmid conjugative transfer protein (106063..105809)
hypothetical protein (106776..106225)
IncI1 plasmid conjugative transfer protein (107632..106949)
IncI1 plasmid conjugative transfer NusG-type transcription antiterminator (108419..107886)
IncI1 plasmid conjugative transfer protein (109148..108861)
inc RNA incI determinant RNA (110209..110138)