INTEGRALL

The Integron Database

Salmonella enterica subsp. enterica serovar Lomita
Accession Number: MH105051
Source: fecal sample - China
Journal: Unpublished
Published: 17-MAY-2018
Title: Characterization of a cointegrate plasmid harbouring blaNDM-1
Authors: Li,R., Xie,M., Liu,L., Zhang,R., Chen,S.
Remarks: Class 1 integron. In37
Promoter: PcWTGN-10
Gene Product Sequence
(930..58)
hypothetical protein (930..58)
uvrD (3109..1325)
uvrD DNA helicase II (3109..1325)
(3289..4161)
hypothetical protein (3289..4161)
(7378..4190)
hypothetical protein (7378..4190)
(8458..7397)
hypothetical protein (8458..7397)
(8595..8461)
hypothetical protein (8595..8461)
(10108..8597)
hypothetical protein (10108..8597)
(10607..10095)
hypothetical protein (10607..10095)
(15189..10885)
hypothetical protein (15189..10885)
(15890..15309)
hypothetical protein (15890..15309)
(16297..15872)
hypothetical protein (16297..15872)
(16739..16287)
hypothetical protein (16739..16287)
(17780..17142)
hypothetical protein (17780..17142)
parM (18829..17792)
parM Plasmid segregation protein ParM (18829..17792)
(19193..20140)
hypothetical protein (19193..20140)
(20137..20973)
hypothetical protein (20137..20973)
(20966..21487)
hypothetical protein (20966..21487)
(21484..21873)
hypothetical protein (21484..21873)
virB (22939..21935)
virB Virulence regulon transcriptional activator VirB (22939..21935)
parA (24189..22936)
parA Plasmid partition protein A (24189..22936)
(24600..24740)
hypothetical protein (24600..24740)
(30709..28028)
hypothetical protein (30709..28028)
(31668..30718)
hypothetical protein (31668..30718)
(32535..31678)
hypothetical protein (32535..31678)
(33031..32549)
hypothetical protein (33031..32549)
(34394..33039)
hypothetical protein (34394..33039)
(34845..34384)
hypothetical protein (34845..34384)
(36118..34847)
hypothetical protein (36118..34847)
(36906..36118)
hypothetical protein (36906..36118)
(37178..36918)
hypothetical protein (37178..36918)
(37639..37286)
hypothetical protein (37639..37286)
(38362..38162)
hypothetical protein (38362..38162)
repB_1 (39663..38788)
repB_1 RepFIB replication protein A (39663..38788)
(40140..41192)
hypothetical protein (40140..41192)
(41212..41412)
hypothetical protein (41212..41412)
(41409..42125)
hypothetical protein (41409..42125)
(42360..43214)
hypothetical protein (42360..43214)
dam (44035..43223)
dam DNA adenine methylase (44035..43223)
(44405..45568)
hypothetical protein (44405..45568)
(45622..45876)
hypothetical protein (45622..45876)
(45816..47507)
hypothetical protein (45816..47507)
(47504..47680)
hypothetical protein (47504..47680)
(47729..48184)
hypothetical protein (47729..48184)
(48171..48452)
hypothetical protein (48171..48452)
(49136..48510)
hypothetical protein (49136..48510)
(49509..51965)
hypothetical protein (49509..51965)
repB_2 (53073..54161)
repB_2 RepFIB replication protein A (53073..54161)
(54557..55213)
hypothetical protein (54557..55213)
(58659..56239)
hypothetical protein (58659..56239)
(59336..58893)
hypothetical protein (59336..58893)
(59643..59380)
hypothetical protein (59643..59380)
taqIM (60498..59737)
taqIM Modification methylase TaqI (60498..59737)
(61343..60579)
hypothetical protein (61343..60579)
(61666..62190)
hypothetical protein (61666..62190)
(62294..62725)
hypothetical protein (62294..62725)
(62718..62975)
hypothetical protein (62718..62975)
(62962..63150)
hypothetical protein (62962..63150)
(63183..63434)
hypothetical protein (63183..63434)
(63837..66227)
hypothetical protein (63837..66227)
(66661..67131)
hypothetical protein (66661..67131)
higB-1 (67181..67477)
higB-1 Toxin HigB-1 (67181..67477)
(67486..68667)
hypothetical protein (67486..68667)
(69073..69450)
hypothetical protein (69073..69450)
(69542..69970)
hypothetical protein (69542..69970)
(70035..70292)
hypothetical protein (70035..70292)
speE (70448..71056)
speE Polyamine aminopropyltransferase (70448..71056)
pvuIIM (71227..72477)
pvuIIM Modification methylase PvuII (71227..72477)
(72772..73092)
hypothetical protein (72772..73092)
(73335..73661)
hypothetical protein (73335..73661)
(73727..73984)
hypothetical protein (73727..73984)
(74274..75005)
hypothetical protein (74274..75005)
(75056..75505)
hypothetical protein (75056..75505)
(75671..78055)
hypothetical protein (75671..78055)
(78305..78544)
hypothetical protein (78305..78544)
(78607..78918)
hypothetical protein (78607..78918)
(78915..79109)
hypothetical protein (78915..79109)
(79164..79697)
hypothetical protein (79164..79697)
(79811..80419)
hypothetical protein (79811..80419)
(80496..80627)
hypothetical protein (80496..80627)
(81014..81799)
hypothetical protein (81014..81799)
(81796..82908)
TelA-like protein (81796..82908)
(82898..83791)
hypothetical protein (82898..83791)
(83966..84193)
hypothetical protein (83966..84193)
(84372..84692)
hypothetical protein (84372..84692)
(85209..85520)
hypothetical protein (85209..85520)
(85525..86016)
hypothetical protein (85525..86016)
(86096..86389)
hypothetical protein (86096..86389)
(86569..86772)
hypothetical protein (86569..86772)
(86827..87051)
hypothetical protein (86827..87051)
(87091..87291)
hypothetical protein (87091..87291)
(87514..87825)
hypothetical protein (87514..87825)
(87879..88055)
hypothetical protein (87879..88055)
(88201..88482)
hypothetical protein (88201..88482)
(88699..89304)
hypothetical protein (88699..89304)
hokB (89602..89817)
hokB Toxin HokB (89602..89817)
(89988..89848)
hypothetical protein (89988..89848)
(91123..90011)
hypothetical protein (91123..90011)
(92095..91775)
hypothetical protein (92095..91775)
(92580..92377)
hypothetical protein (92580..92377)
(92983..92627)
hypothetical protein (92983..92627)
(93639..93037)
hypothetical protein (93639..93037)
(94679..93735)
hypothetical protein (94679..93735)
(95190..95366)
hypothetical protein (95190..95366)
(95783..96967)
hypothetical protein (95783..96967)
(97033..97314)
hypothetical protein (97033..97314)
(97629..98330)
hypothetical protein (97629..98330)
(98465..98761)
hypothetical protein (98465..98761)
(98806..99243)
hypothetical protein (98806..99243)
(99311..99847)
hypothetical protein (99311..99847)
(100073..100441)
hypothetical protein (100073..100441)
(100874..101068)
hypothetical protein (100874..101068)
(101128..102336)
hypothetical protein (101128..102336)
(102471..102346)
hypothetical protein (102471..102346)
gltS (103907..102702)
gltS Sodium/glutamate symporter (103907..102702)
(104351..104671)
hypothetical protein (104351..104671)
(104664..105050)
hypothetical protein (104664..105050)
(105121..105744)
hypothetical protein (105121..105744)
tetR (106345..105722)
tetR Tetracycline repressor protein class B from transposon Tn10 (106345..105722)
tetA (106427..107632)
tetA Tetracycline resistance protein, class B (106427..107632)
tetC (108413..107745)
tetC Transposon Tn10 TetC protein (108413..107745)
tetD (108426..108842)
tetD Transposon Tn10 TetD protein (108426..108842)
(109499..108852)
hypothetical protein (109499..108852)
(109503..110426)
hypothetical protein (109503..110426)
(111040..110471)
hypothetical protein (111040..110471)
(111666..111950)
hypothetical protein (111666..111950)
(112016..112369)
hypothetical protein (112016..112369)
(113387..112656)
hypothetical protein (113387..112656)
sppA (114570..113389)
sppA Putative signal peptide peptidase SppA (114570..113389)
(115243..114581)
hypothetical protein (115243..114581)
(116339..115230)
hypothetical protein (116339..115230)
(118423..116339)
hypothetical protein (118423..116339)
(121569..118423)
hypothetical protein (121569..118423)
(122316..121579)
hypothetical protein (122316..121579)
(122798..122313)
hypothetical protein (122798..122313)
(123558..124358)
hypothetical protein (123558..124358)
(124360..124872)
hypothetical protein (124360..124872)
(125464..126510)
hypothetical protein (125464..126510)
(126500..127915)
hypothetical protein (126500..127915)
(127924..131874)
hypothetical protein (127924..131874)
(132503..131997)
hypothetical protein (132503..131997)
(133574..132513)
hypothetical protein (133574..132513)
(134255..133698)
hypothetical protein (134255..133698)
(134877..134338)
hypothetical protein (134877..134338)
dsbC (135025..135774)
dsbC Thiol:disulfide interchange protein DsbC (135025..135774)
(135799..136191)
hypothetical protein (135799..136191)
(136225..136647)
hypothetical protein (136225..136647)
(137318..136707)
hypothetical protein (137318..136707)
(137425..138234)
hypothetical protein (137425..138234)
dinB1 (139533..138280)
dinB1 DNA polymerase IV 1 (139533..138280)
lexA (139957..139523)
lexA LexA repressor (139957..139523)
(140151..140759)
hypothetical protein (140151..140759)
(140913..141266)
hypothetical protein (140913..141266)
(141489..144824)
hypothetical protein (141489..144824)
(144891..145277)
hypothetical protein (144891..145277)
(145444..145971)
hypothetical protein (145444..145971)
(146429..146022)
hypothetical protein (146429..146022)
(146805..146629)
hypothetical protein (146805..146629)
(147558..146887)
hypothetical protein (147558..146887)
(147908..147603)
hypothetical protein (147908..147603)
(148248..147931)
hypothetical protein (148248..147931)
(148440..149843)
hypothetical protein (148440..149843)
(150791..149874)
hypothetical protein (150791..149874)
(151793..150795)
hypothetical protein (151793..150795)
(152271..152020)
hypothetical protein (152271..152020)
(152633..152436)
hypothetical protein (152633..152436)
(152990..152703)
hypothetical protein (152990..152703)
(153282..153028)
hypothetical protein (153282..153028)
(153561..153328)
hypothetical protein (153561..153328)
(153877..153620)
hypothetical protein (153877..153620)
(154265..153951)
hypothetical protein (154265..153951)
(155266..154313)
hypothetical protein (155266..154313)
yhcR (155727..155212)
yhcR Endonuclease YhcR (155727..155212)
dcm (155942..157369)
dcm DNA-cytosine methyltransferase (155942..157369)
(157430..157597)
hypothetical protein (157430..157597)
(157620..158939)
hypothetical protein (157620..158939)
(158952..159155)
hypothetical protein (158952..159155)
smc (160424..159219)
smc Chromosome partition protein Smc (160424..159219)
(161239..160421)
hypothetical protein (161239..160421)
(161882..162262)
hypothetical protein (161882..162262)
(162320..162610)
hypothetical protein (162320..162610)
(162782..162892)
hypothetical protein (162782..162892)
frmR (162876..163151)
frmR Transcriptional repressor FrmR (162876..163151)
frmA (163182..164291)
frmA S-(hydroxymethyl)glutathione dehydrogenase (163182..164291)
(164333..164731)
hypothetical protein (164333..164731)
frmB (164782..165633)
frmB S-formylglutathione hydrolase FrmB (164782..165633)
bin3 (166296..165661)
bin3 Putative transposon Tn552 family DNA-invertase bin3 (166296..165661)
(166464..169451)
hypothetical protein (166464..169451)
(169487..169891)
hypothetical protein (169487..169891)
(169951..170406)
hypothetical protein (169951..170406)
(170447..170683)
hypothetical protein (170447..170683)
(170709..171002)
hypothetical protein (170709..171002)
(171113..170976)
hypothetical protein (171113..170976)
hns (171180..171584)
hns DNA-binding protein H-NS, plasmid (171180..171584)
(172129..171926)
hypothetical protein (172129..171926)
(172799..172191)
hypothetical protein (172799..172191)
merR (173320..172865)
merR Mercuric resistance operon regulatory protein (173320..172865)
(173392..173757)
hypothetical protein (173392..173757)
merP (173773..174048)
merP Mercuric transport protein periplasmic component (173773..174048)
merC (174076..174501)
merC Mercuric resistance protein MerC (174076..174501)
merA (174540..176225)
merA Mercuric reductase (174540..176225)
(176243..176608)
hypothetical protein (176243..176608)
(176605..176841)
hypothetical protein (176605..176841)
(176907..177119)
hypothetical protein (176907..177119)
tnsB (177292..178560)
tnsB Transposon Tn7 transposition protein TnsB (177292..178560)
(178607..178852)
hypothetical protein (178607..178852)
neo (180314..179499)
neo Aminoglycoside 3'-phosphotransferase (180314..179499)
(180465..181169)
hypothetical protein (180465..181169)
(181291..182196)
hypothetical protein (181291..182196)
(182193..183431)
putative multidrug-efflux transporter (182193..183431)
(183431..184015)
hypothetical protein (183431..184015)
(184526..185347)
hypothetical protein (184526..185347)
(185803..185498)
hypothetical protein (185803..185498)
srpC (187019..185814)
srpC putative chromate transport protein (187019..185814)
(187247..188251)
hypothetical protein (187247..188251)
(188705..188433)
hypothetical protein (188705..188433)
folP_1 (189672..188833)
folP_1 Dihydropteroate synthase (189672..188833)
(190106..189666)
Multidrug transporter (190106..189666)
ampR (191138..190263)
ampR HTH-type transcriptional activator AmpR (191138..190263)
ampC (191249..192388)
ampC Beta-lactamase (191249..192388)
(192583..193404)
hypothetical protein (192583..193404)
pspD (193969..193739)
pspD Phage shock protein D (193969..193739)
pspC (194337..193978)
pspC Phage shock protein C (194337..193978)
pspB (194561..194337)
pspB Phage shock protein B (194561..194337)
pspA (195284..194616)
pspA Phage shock protein A (195284..194616)
pspF (195455..196429)
pspF Psp operon transcriptional activator (195455..196429)
(196512..197156)
Pentapeptide repeat protein (196512..197156)
yghA (198160..197252)
yghA putative oxidoreductase YghA (198160..197252)
pncC (198852..198337)
pncC Nicotinamide-nucleotide amidohydrolase PncC (198852..198337)
(199309..198863)
hypothetical protein (199309..198863)
(199822..199319)
hypothetical protein (199822..199319)
(199954..200346)
hypothetical protein (199954..200346)
sapA (200647..202290)
sapA Peptide transport periplasmic protein SapA (200647..202290)
sapB (202287..203252)
sapB Putrescine export system permease protein SapB (202287..203252)
sapC (203239..203703)
sapC Peptide transport system permease protein SapC (203239..203703)
(205469..203928)
hypothetical protein (205469..203928)
folP_2 (206713..205874)
folP_2 Dihydropteroate synthase (206713..205874)
emrE (207054..206707)
emrE Multidrug transporter EmrE (207054..206707)
(207729..207277)
hypothetical protein (207729..207277)
cat (208446..207814)
cat Chloramphenicol acetyltransferase (208446..207814)
bla (209459..208584)
bla Beta-lactamase OXA-1 (209459..208584)
aacA4 (210144..209545)
aacA4 Aminoglycoside N(6')-acetyltransferase type 1 (210144..209545)
xerD (210391..211404)
xerD Tyrosine recombinase XerD (210391..211404)
hin (211710..212267)
hin DNA-invertase hin (211710..212267)
(212270..215242)
hypothetical protein (212270..215242)
(215321..216325)
hypothetical protein (215321..216325)
(216824..216507)
hypothetical protein (216824..216507)
(217148..216840)
hypothetical protein (217148..216840)
(218122..217697)
hypothetical protein (218122..217697)
(219190..218375)
hypothetical protein (219190..218375)
(219613..219203)
hypothetical protein (219613..219203)
(219920..219714)
hypothetical protein (219920..219714)
hipA (221306..219981)
hipA Serine/threonine-protein kinase HipA (221306..219981)
(221607..221311)
hypothetical protein (221607..221311)
(223393..222005)
hypothetical protein (223393..222005)
(223895..223398)
hypothetical protein (223895..223398)
(224753..224064)
hypothetical protein (224753..224064)
(225804..225412)
hypothetical protein (225804..225412)
(226209..226343)
hypothetical protein (226209..226343)
(226725..227711)
hypothetical protein (226725..227711)
yjcD (227708..229747)
yjcD Putative ATP-dependent DNA helicase YjcD (227708..229747)
(230364..230191)
hypothetical protein (230364..230191)
(230990..231331)
hypothetical protein (230990..231331)
(231423..231614)
hypothetical protein (231423..231614)
(232310..231855)
hypothetical protein (232310..231855)
yceD_1 (233642..232401)
yceD_1 General stress protein 16U (233642..232401)
yceD_2 (234646..234071)
yceD_2 General stress protein 16U (234646..234071)
yceD_3 (235293..234715)
yceD_3 General stress protein 16U (235293..234715)
alx (236382..235342)
alx Inner membrane protein alx (236382..235342)
(236860..236405)
hypothetical protein (236860..236405)
yceD_4 (238040..236883)
yceD_4 General stress protein 16U (238040..236883)
yceD_5 (238621..238040)
yceD_5 General stress protein 16U (238621..238040)
(238942..240000)
hypothetical protein (238942..240000)
(240010..241152)
hypothetical protein (240010..241152)
(241145..241918)
hypothetical protein (241145..241918)
stiP (241920..242999)
stiP Cysteine protease StiP (241920..242999)
(242999..243955)
hypothetical protein (242999..243955)
(243966..245174)
hypothetical protein (243966..245174)
(245192..245659)
hypothetical protein (245192..245659)
(246122..246760)
hypothetical protein (246122..246760)
yceD_6 (246783..247424)
yceD_6 General stress protein 16U (246783..247424)
(247424..248062)
hypothetical protein (247424..248062)
(248147..249187)
hypothetical protein (248147..249187)
(249187..250824)
hypothetical protein (249187..250824)
(250793..252349)
hypothetical protein (250793..252349)
(253627..252515)
hypothetical protein (253627..252515)
hha (254170..253958)
hha Hemolysin expression-modulating protein Hha (254170..253958)
(254340..255515)
hypothetical protein (254340..255515)
(255866..255537)
hypothetical protein (255866..255537)
(256722..255817)
hypothetical protein (256722..255817)
(257694..256732)
hypothetical protein (257694..256732)
(258231..257785)
hypothetical protein (258231..257785)
(258784..258248)
hypothetical protein (258784..258248)
(259115..258858)
hypothetical protein (259115..258858)
(259587..259123)
hypothetical protein (259587..259123)
(260033..259758)
hypothetical protein (260033..259758)
(261253..260297)
hypothetical protein (261253..260297)
(262363..261425)
hypothetical protein (262363..261425)
(263350..262430)
hypothetical protein (263350..262430)
(264354..263419)
hypothetical protein (264354..263419)
(265302..264424)
hypothetical protein (265302..264424)
(265902..265381)
hypothetical protein (265902..265381)
(267404..266172)
hypothetical protein (267404..266172)
(267739..267518)
hypothetical protein (267739..267518)
(269818..267812)
hypothetical protein (269818..267812)
(271023..269896)
hypothetical protein (271023..269896)
(271260..271087)
hypothetical protein (271260..271087)
nirQ (272450..271392)
nirQ Denitrification regulatory protein NirQ (272450..271392)
(273485..272508)
hypothetical protein (273485..272508)
(273854..273546)
hypothetical protein (273854..273546)