INTEGRALL

The Integron Database

Sym plasmid
Accession Number: MH392234
Source: lettuce rhizosphere
Journal: Unpublished
Published: 20-JUL-2019
Title: Plant species dependent abundance and diversity of IncP-1 plasmids in the rhizosphere - sequence analysis provides new insights into the role as efficient and dynamic means for rapid bacterial adaptation
Authors: Nour,E., Shintani,M., Elsayed,T., Blau,K., Jechalke,S., Sproeer,C., Bunk,B., Overmann,J., Smalla,K.
Remarks: Class 1 integron. In1727
Promoter: PcW
Gene Product Sequence
trfA (1..1221)
trfA Plasmid replication initiator protein TrfA (1..1221)
merR (1768..1334)
merR Mercuric resistance operon regulatory protein (1768..1334)
(1840..2190)
putative mercuric transport protein (1840..2190)
merP (2203..2478)
merP Periplasmic mercury ion-binding protein (2203..2478)
merA (2550..4235)
merA Mercuric reductase (2550..4235)
(4253..4618)
transcriptional regulator MerD (4253..4618)
(4615..4851)
putative mercury resistance protein (4615..4851)
cph2 (4848..5837)
cph2 Bacteriophytochrome cph2 (4848..5837)
tnpR (5968..6528)
tnpR DNA-invertase hin (5968..6528)
(6531..9290)
Transposase, TnpA family (6531..9290)
(9409..12324)
Transposase, TnpA family (9409..12324)
yafQ (13628..13347)
yafQ mRNA interferase YafQ (13628..13347)
kluA (13878..13615)
kluA Antitoxin DinJ (13878..13615)
klcA (14051..14479)
klcA Antirestriction protein KlcA (14051..14479)
(14479..14742)
hypothetical protein (14479..14742)
(14754..15962)
hypothetical protein (14754..15962)
(15979..16236)
hypothetical protein (15979..16236)
(16394..16630)
hypothetical protein (16394..16630)
(16839..17165)
hypothetical protein (16839..17165)
(17167..17496)
hypothetical protein (17167..17496)
incC1 (17590..18672)
incC1 IncC1 (17590..18672)
korA (17603..17911)
korA Regulatory protein KorA (17603..17911)
incC2 (17908..18672)
incC2 Sporulation initiation inhibitor protein soj (17908..18672)
korB (18669..19718)
korB Transcriptional repressor protein KorB (18669..19718)
(19897..20928)
chromosome segregation protein SMC (19897..20928)
(21099..21446)
KfrB protein (21099..21446)
(21475..22128)
KfrC protein (21475..22128)
traM (22776..22331)
traL (23499..22776)
(23897..23499)
conjugal transfer protein TraK (23897..23499)
traJ (24271..24645)
traJ Relaxosome protein (24271..24645)
(24680..26920)
conjugal transfer relaxase TraI (24680..26920)
traG (26917..28830)
traG Conjugal transfer protein TraG (26917..28830)
(28827..29363)
conjugal transfer peptidase TraF (28827..29363)
traE (29375..31438)
traE DNA topoisomerase 3 (29375..31438)
(31460..31849)
hypothetical protein (31460..31849)
traC (31853..36199)
traC DNA primase TraC (31853..36199)
tniA (36753..38432)
tniA transposase (36753..38432)
(38435..39343)
Bacterial TniB protein (38435..39343)
(39340..40557)
TniQ (39340..40557)
tniR (40604..41242)
tniR DNA-invertase hin (40604..41242)
qacE (41823..41491)
qacE Methyl viologen resistance protein C (41823..41491)
intI1 (42481..43494)
intI1 Tyrosine recombinase (42481..43494)
parA (43778..44614)
parA Putative transposon Tn552 family DNA-invertase bin3 (43778..44614)
(45290..44616)
Site-specific DNA methylase (45290..44616)
(45876..45445)
Type IV secretion system putative outer membrane lipoprotein (45876..45445)
(46590..45892)
conjugal transfer protein TrbP (46590..45892)
(46856..46590)
conjugal transfer protein TrbO (46856..46590)
(47520..46885)
conjugal transfer protein TrbN (47520..46885)
(48121..47534)
conjugal transfer protein TrbM (48121..47534)
(49857..48139)
conjugal transfer protein TrbL (49857..48139)
(50095..49868)
conjugal transfer protein TrbK (50095..49868)
(50869..50105)
conjugal transfer protein TrbJ (50869..50105)
(52311..50890)
Type IV secretion system protein (52311..50890)
(52804..52316)
conjugal transfer protein TrbH (52804..52316)
trbG (53706..52807)
trbG Type IV secretion system protein (53706..52807)
(54506..53724)
conjugal transfer protein TrbF (54506..53724)
trbE (57061..54503)
trbE Type IV secretion system protein (57061..54503)
(57369..57058)
conjugal transfer protein TrbD (57369..57058)
(57837..57373)
conjugal transfer protein TrbC (57837..57373)
trbB (58816..57854)
trbB Pertussis toxin liberation protein H (58816..57854)
trbA (59488..59126)
trbA TrbA (59488..59126)
ssb (59602..59943)
ssb Helix-destabilizing protein (59602..59943)