INTEGRALL

The Integron Database

Escherichia coli
Accession Number: MK181560
Source: n.m.
Journal: J. Antimicrob. Chemother. (2018) In press
Published: 26-DEC-2018
Title: ST131 fimH22 Escherichia coli isolate with a blaCMY-2/IncI1/ST12 plasmid obtained from a patient with bloodstream infection: highly similar to E. coli isolates of broiler origin
Authors: Roer,L., Overballe-Petersen,S., Hansen,F., Johannesen,T.B., Stegger,M., Bortolaia,V., Leekitcharoenphon,P., Korsgaard,H.B., Seyfarth,A.M., Mossong,J., Wattiau,P., Boland,C., Hansen,D.S., Hasman,H., Hammerum,A.M., Hendriksen,R.S.
Remarks: Class 1 integron. In54
Promoter: PcH1
Gene Product Sequence
replication initiation protein (1..1077)
hypothetical protein (1409..1558)
hypothetical protein (1773..1985)
Mobile element protein (3308..2100)
hypothetical protein (3561..3289)
Mobile element protein (6052..3581)
Mobile element protein (6616..6056)
hypothetical protein (6605..6772)
Mobile element protein (6992..6792)
Integron integrase IntIPac (8358..7345)
Dihydrofolate reductase (8765..8989)
Streptomycin 3''-O-adenylyltransferase (9120..9908)
Mobile element protein (10110..10814)
Mobile element protein (10933..11622)
Dihydropteroate synthase (12310..13125)
Phosphoglucosamine mutase (13212..13514)
Mobile element protein (14826..13690)
Prevent host death protein, Phd antitoxin D (15193..15462)
YacB (15459..15740)
hypothetical protein (15780..16628)
YadA (16745..17218)
hypothetical protein (17450..17572)
hypothetical protein (17964..17695)
hypothetical protein (18494..17961)
hypothetical protein (19113..18511)
hypothetical protein (19389..19270)
hypothetical protein (19467..20813)
hypothetical protein (20822..20986)
3',5'-cyclic-nucleotide phosphodiesterase (21164..22972)
hypothetical protein (23337..22990)
hypothetical protein (23456..23776)
YdeA protein (24414..23824)
YdfA protein (24671..24414)
hypothetical protein (24823..24656)
hypothetical protein (24805..25017)
hypothetical protein (24998..26023)
hypothetical protein (26174..26013)
hypothetical protein (26461..26736)
hypothetical protein (27296..27042)
hypothetical protein (28267..27341)
hypothetical protein (28473..28360)
hypothetical protein (28685..28491)
hypothetical protein (28799..29212)
Resolvase (29214..29993)
hypothetical protein (30173..30817)
ybiA (30904..31212)
Putative stability/partitioning protein (31626..32606)
stable plasmid inheritance protein (32599..33015)
Error-prone, lesion bypass DNA polymerase V (UmuC) (34291..33017)
Error-prone repair protein UmuD (34728..34291)
hypothetical protein (34973..34725)
hypothetical protein (35349..35236)
hypothetical protein (35391..36293)
hypothetical protein (36290..36601)
Adenine-specific methyltransferase (36678..37361)
putative cytoplasmic protein (37362..37583)
YcgB (37595..38029)
hypothetical protein (38029..38850)
hypothetical protein (39187..38966)
Putative antirestriction protein (39268..39693)
hypothetical protein (39740..40162)
hypothetical protein (40159..40350)
hypothetical protein (40999..40541)
Single-stranded DNA-binding protein (41120..41647)
hypothetical protein (41705..41938)
hypothetical protein (41997..43955)
PsiB protein (44010..44444)
PsiA protein (44441..45160)
Eaa protein (45157..45753)
Antirestriction protein ArdA (45832..46716)
hypothetical protein (46700..46843)
hypothetical protein (47140..46856)
hypothetical protein (47340..47137)
hypothetical protein (47445..47879)
YDFB protein (47971..48237)
Mobile element protein (48302..49243)
hypothetical protein (49305..49475)
hypothetical protein (49757..49506)
hypothetical protein (49988..49791)
hypothetical protein (50167..49958)
hypothetical protein (50131..50295)
hypothetical protein (50337..51185)
hypothetical protein (51605..51270)
Nickel ABC transporter, periplasmic nickel-binding protein NikA (51839..52171)
hypothetical protein (52182..54881)
hypothetical protein (57209..54918)
TrbB protein (58272..57202)
TrbA (59499..58291)
post-segregation killing protein (59788..59943)
hypothetical protein (60266..60015)
hypothetical protein (61101..60925)
hypothetical protein (61258..61130)
Phage minor tail protein (61493..61702)
surface exclusion protein (62424..61774)
IncI1 plasmid conjugative transfer integral membrane protein TraY (64420..62498)
Mobile element protein (64503..64829)
Mobile element protein (64829..65716)
IncI1 plasmid conjugative transfer integral membrane protein TraY (65979..65719)
IncI1 plasmid conjugative transfer protein TraX (66660..66076)
IncI1 plasmid conjugative transfer protein TraW (67891..66689)
IncI1 plasmid conjugative transfer protein TraV (68283..67858)
IncI1 plasmid conjugative transfer protein TraU (71516..68472)
IncI1 plasmid conjugative transfer protein TraT (72406..71606)
IncI1 plasmid conjugative transfer protein TraS (72578..72390)
IncI1 plasmid conjugative transfer protein TraR (73046..72642)
IncI1 plasmid conjugative transfer protein TraQ (73624..73097)
IncI1 plasmid conjugative transfer protein TraP (74328..73624)
IncI1 plasmid conjugative transfer protein TraO (75617..74328)
IncI1 plasmid conjugative transfer protein TraN (76603..75620)
IncI1 plasmid conjugative transfer protein TraM (77306..76614)
IncI1 plasmid conjugative transfer protein TraL (77650..77303)
IncI1 plasmid conjugative transfer DNA primase (81435..77668)
Plasmid conjugative transfer endonuclease (82075..81524)
IncI1 plasmid conjugative transfer protein TraK (82380..82090)
IncI1 plasmid conjugative transfer protein TraJ,related to pilus biogenesis/retracton protein (83525..82377)
IncI1 plasmid conjugative transfer protein TraI (84340..83522)
IncI1 plasmid conjugative transfer protein TraH (84795..84337)
hypothetical protein (85027..85176)
IncI1 plasmid conjugative transfer protein TraG (85774..85190)
IncI1 plasmid conjugative transfer protein TraF (87036..85834)
IncI1 plasmid conjugative transfer protein TraE (87945..87121)
Shufflon-specific DNA recombinase (89283..88096)
IncI1 plasmid conjugative transfer pilus-tip adhesin protein PilV (89408..89656)
hypothetical protein (90431..90625)
Tryptophan synthase beta chain like (90931..91203)
Beta-lactamase (92125..91250)
hypothetical protein (92432..92310)
Mobile element protein (93675..92413)
IncI1 plasmid conjugative transfer pilus-tip adhesin protein PilV (94999..93857)
Type-IV sectretion leader peptidase/N-methyltransferase (95592..94987)
IncI1 plasmid conjugative transfer putative membrane protein PilT (96188..95628)
IncI1 plasmid conjugative transfer prepilin PilS (96812..96198)
IncI1 plasmid conjugative transfer inner membrane protein PilR (97927..96830)
IncI1 plasmid conjugative transfer ATPase PilQ (99493..97940)
IncI1 plasmid pilus assembly protein PilP (99956..99504)
hypothetical protein (100171..100058)
Mobile element protein (101042..100155)
Mobile element protein (101368..101042)
IncI1 plasmid pilus assembly protein PilO (102551..101394)
IncI1 plasmid conjugative transfer lipoprotein PilN (104226..102544)
IncI1 plasmid conjugative transfer protein PilM (104677..104240)
IncI1 plasmid conjugative transfer protein PilL (105744..104677)
IncI1 plasmid conjugative transfer protein PilK (106071..105778)
hypothetical protein (106124..106255)
IncI1 plasmid conjugative transfer protein PilJ (106499..106368)
hypothetical protein (106516..106734)
IncI1 plasmid conjugative transfer protein PilI (107094..106840)
hypothetical protein (107807..107256)
IncI1 plasmid conjugative transfer protein TraC (108663..107980)
hypothetical protein (108656..108769)
IncI1 plasmid conjugative transfer NusG-type transcription antiterminator TraB (109450..108917)
hypothetical protein (109578..109456)
IncI1 plasmid conjugative transfer protein TraA (110179..109892)
hypothetical protein (111125..111006)