INTEGRALL

The Integron Database

Salmonella entericasubsp. enterica serovar Braenderup
Accession Number: MK191835
Source: swine
Journal: Unpublished
Published: 19-DEC-2018
Title: Plasmids harboring resistance genes to quinolones and/or extended spectrum cephalosporins in nontyphoidal Salmonella enterica serovars from swine in the Midwestern United States
Authors: Elnekave,E., Hong,S.L., Lim,S., Hayer,S.S., Boxrud,D., Taylor,A.J., Lappi,V., Noyes,N., Johnson,T.J., Rovira,A., Davies,P., Perez,A., Alvarez,J.
Remarks: Class 1 integrons. In46, In127,In615
Promoter: PcH2TGN-10, PcH1, Pc
Gene Product Sequence
repB (1..876)
repB RepFIB replication protein A (1..876)
hypothetical protein (2025..2378)
hypothetical protein (2429..2746)
hypothetical protein (2758..3546)
hypothetical protein (3546..4817)
hypothetical protein (4819..5280)
hypothetical protein (5270..6625)
hypothetical protein (6633..7115)
hypothetical protein (7129..7986)
hypothetical protein (7996..8946)
traC (8955..11636)
traC Protein TraC (8955..11636)
hypothetical protein (15475..16728)
virB (16725..17729)
virB Virulence regulon transcriptional activator VirB (16725..17729)
hypothetical protein (18180..17791)
hypothetical protein (18698..18177)
hypothetical protein (19527..18691)
hypothetical protein (20471..19524)
parM (20835..21872)
parM Plasmid segregation protein ParM (20835..21872)
hypothetical protein (21884..22522)
IS5 family transposase IS903 (23547..22579)
hypothetical protein (23991..24443)
hypothetical protein (24433..24858)
hypothetical protein (24840..25421)
hypothetical protein (25541..29845)
hypothetical protein (30000..29740)
hypothetical protein (30123..30635)
hypothetical protein (30622..32133)
hypothetical protein (32135..32269)
hypothetical protein (32272..33333)
hypothetical protein (33352..36540)
hypothetical protein (37441..36569)
uvrD (37621..39405)
uvrD DNA helicase II (37621..39405)
hypothetical protein (39800..40672)
hypothetical protein (40730..41107)
hypothetical protein (41168..41587)
IS1 family transposase IS1R (41899..41522)
hypothetical protein (41971..42186)
hypothetical protein (42290..42922)
hypothetical protein (42980..44038)
hypothetical protein (44170..44343)
hypothetical protein (44407..45534)
hypothetical protein (45611..47617)
hypothetical protein (47690..47911)
hypothetical protein (48025..49257)
hypothetical protein (49527..50048)
hypothetical protein (50127..51005)
hypothetical protein (51075..52010)
hypothetical protein (52079..52999)
hypothetical protein (53066..54004)
hypothetical protein (54176..55132)
hypothetical protein (55396..55671)
hypothetical protein (55716..56306)
hypothetical protein (56314..56571)
hypothetical protein (56645..57181)
hypothetical protein (57198..57644)
hypothetical protein (57735..58697)
hypothetical protein (58707..59612)
hypothetical protein (59563..59892)
hypothetical protein (61089..59914)
hha (61259..61471)
hha Hemolysin expression-modulating protein Hha (61259..61471)
hypothetical protein (61832..62914)
hypothetical protein (64636..63080)
hypothetical protein (66242..64605)
hypothetical protein (67282..66242)
hypothetical protein (68005..67367)
yceD_1 (68646..68005)
yceD_1 General stress protein 16U (68646..68005)
hypothetical protein (69307..68669)
hypothetical protein (69465..69304)
hypothetical protein (70237..69770)
hypothetical protein (71463..70255)
hypothetical protein (72430..71474)
stiP (73509..72430)
stiP Cysteine protease StiP (73509..72430)
hypothetical protein (74284..73511)
hypothetical protein (75419..74277)
hypothetical protein (76487..75429)
yceD_2 (76808..77389)
yceD_2 General stress protein 16U (76808..77389)
hypothetical protein (77389..78546)
hypothetical protein (78569..79024)
alx (79047..80087)
alx Putative membrane-bound redox modulator Alx (79047..80087)
yceD_3 (80136..80714)
yceD_3 General stress protein 16U (80136..80714)
yceD_4 (80783..81358)
yceD_4 General stress protein 16U (80783..81358)
hypothetical protein (81787..83028)
hypothetical protein (83119..83574)
hypothetical protein (84006..83815)
hypothetical protein (84439..84098)
hypothetical protein (85065..85265)
hypothetical protein (85426..85680)
yjcD (87722..85683)
yjcD Putative ATP-dependent DNA helicase YjcD (87722..85683)
hypothetical protein (88705..87719)
hypothetical protein (89626..90018)
hypothetical protein (90677..91333)
hypothetical protein (91536..92033)
hypothetical protein (92038..93426)
hypothetical protein (93824..94120)
hipA (94125..95450)
hipA Serine/threonine-protein kinase toxin HipA (94125..95450)
hypothetical protein (95511..95717)
hypothetical protein (95818..96228)
hypothetical protein (96241..96765)
IS110 family transposase IS4321R (97951..96947)
merR1 (98476..98042)
merR1 Mercuric resistance operon regulatory protein (98476..98042)
kdpB (98562..100967)
kdpB Potassium-transporting ATPase ATP-binding subunit (98562..100967)
lspA (100964..102040)
lspA Lipoprotein signal peptidase (100964..102040)
hypothetical protein (102261..102049)
hypothetical protein (102563..102327)
hypothetical protein (102925..102560)
merA (104628..102943)
merA Mercuric reductase (104628..102943)
merC (105092..104667)
merC Mercuric transport protein MerC (105092..104667)
merP (105395..105120)
merP Mercuric transport protein periplasmic component (105395..105120)
merT (105776..105411)
merT Mercuric transport protein MerT (105776..105411)
merR (105848..106303)
merR Mercuric resistance operon regulatory protein (105848..106303)
hypothetical protein (106369..106728)
hypothetical protein (106981..107406)
hypothetical protein (107955..108263)
hypothetical protein (108279..109136)
hypothetical protein (109198..109401)
hypothetical protein (109709..109488)
hns (110147..109743)
hns DNA-binding protein H-NS, plasmid (110147..109743)
hypothetical protein (110618..110325)
hypothetical protein (110949..110644)
hypothetical protein (111375..111004)
hypothetical protein (112100..111435)
hypothetical protein (112538..112158)
bla_1 (113728..112868)
bla_1 Beta-lactamase TEM (113728..112868)
tnpR (114468..113911)
tnpR Transposon Tn3 resolvase (114468..113911)
Tn3 family transposase Tn2 (114632..117637)
hypothetical protein (118248..118430)
Tn3 family transposase ISEc63 (119390..118455)
Tn3 family transposase ISEc63 (121462..119405)
IS6 family transposase IS26 (122355..121651)
tetR (123023..122367)
tetR Tetracycline repressor protein class D (123023..122367)
tetA (123119..124303)
tetA Tetracycline resistance protein, class B (123119..124303)
frmA (124398..125507)
frmA S-(hydroxymethyl)glutathione dehydrogenase (124398..125507)
frmB (125529..125963)
frmB S-formylglutathione hydrolase FrmB (125529..125963)
IS6 family transposase IS26 (126701..125997)
hypothetical protein (127128..126748)
aacA4_1 (127230..127859)
aacA4_1 Aminoglycoside N(6')-acetyltransferase type 1 (127230..127859)
IS21 family transposase ISCfr8 (128827..128087)
hypothetical protein (130337..128814)
IS6 family transposase IS26 (131186..130482)
xerC_1 (132257..131223)
xerC_1 Tyrosine recombinase XerC (132257..131223)
ant1 (132289..133194)
ant1 Streptomycin 3''-adenylyltransferase (132289..133194)
emrE_1 (133358..133705)
emrE_1 Multidrug transporter EmrE (133358..133705)
folP_1 (133699..134538)
folP_1 Dihydropteroate synthase (133699..134538)
hypothetical protein (134943..136484)
ligA (136750..137250)
ligA DNA ligase (136750..137250)
hypothetical protein (137250..137819)
hypothetical protein (137767..138435)
xerC_2 (139435..138422)
xerC_2 Tyrosine recombinase XerC (139435..138422)
neo_1 (139593..140396)
neo_1 Aminoglycoside 3'-phosphotransferase (139593..140396)
hypothetical protein (140396..141232)
hypothetical protein (141413..142204)
hypothetical protein (142560..142219)
IS6 family transposase IS26 (143720..143016)
folP1 (144190..143732)
folP1 Dihydropteroate synthase (144190..143732)
hypothetical protein (144295..144585)
qnrB2 (144681..145325)
hypothetical protein (145819..145367)
sapA (146354..147004)
sapA Peptide transport periplasmic protein SapA (146354..147004)
hypothetical protein (148667..147126)
hypothetical protein (149464..149072)
IS6 family transposase IS26 (150269..149565)
hypothetical protein (150911..150435)
eptA (152607..150988)
eptA Phosphoethanolamine transferase EptA (152607..150988)
IS5 family transposase IS903 (153764..152796)
sasA (153803..155149)
sasA Adaptive-response sensory-kinase SasA (153803..155149)
pcoE (155367..155801)
pcoE putative copper-binding protein PcoE (155367..155801)
hypothetical protein (157174..156059)
rcnR (157297..157569)
rcnR Transcriptional repressor RcnR (157297..157569)
hypothetical protein (157830..157663)
hypothetical protein (158035..158853)
smc (158850..160055)
smc Chromosome partition protein Smc (158850..160055)
hypothetical protein (160322..160119)
hypothetical protein (161654..160335)
hypothetical protein (161844..161677)
dcm (163332..161905)
dcm DNA-cytosine methyltransferase (163332..161905)
hypothetical protein (163547..163873)
IS5 family transposase IS903 (163895..164863)
hypothetical protein (165047..166027)
hypothetical protein (166075..166389)
hypothetical protein (166463..166720)
hypothetical protein (166779..167012)
hypothetical protein (167009..167119)
hypothetical protein (167058..167312)
hypothetical protein (167350..167637)
hypothetical protein (167674..167904)
hypothetical protein (168069..168320)
hypothetical protein (168812..170290)
hypothetical protein (170309..171136)
arsC (171621..171196)
arsC Arsenate reductase (171621..171196)
arsB (172923..171634)
arsB Arsenical pump membrane protein (172923..171634)
hypothetical protein (173289..172969)
arsH (173376..174080)
arsH NADPH-dependent FMN reductase ArsH (173376..174080)
ISNCY family transposase ISBcen27 (175516..174113)
IS5 family transposase IS903 (176704..175736)
pbuE (177310..176726)
pbuE Purine efflux pump PbuE (177310..176726)
yqhD (178623..177388)
yqhD Alcohol dehydrogenase YqhD (178623..177388)
pgrR (178739..179632)
pgrR HTH-type transcriptional regulator PgrR (178739..179632)
neo_2 (180584..179769)
neo_2 Aminoglycoside 3'-phosphotransferase (180584..179769)
IS5 family transposase IS903 (181713..180745)
hypothetical protein (181926..181735)
hypothetical protein (182033..182644)
hypothetical protein (183126..182704)
hypothetical protein (183552..183160)
dsbC (184326..183577)
dsbC Thiol:disulfide interchange protein DsbC (184326..183577)
hypothetical protein (184474..185013)
hypothetical protein (185096..185653)
hypothetical protein (185777..186838)
hypothetical protein (186848..187354)
hypothetical protein (191427..187477)
hypothetical protein (192851..191436)
hypothetical protein (193887..192841)
hypothetical protein (194991..194479)
hypothetical protein (195793..194993)
hypothetical protein (196553..197038)
hypothetical protein (197035..197772)
hypothetical protein (197782..200928)
hypothetical protein (200928..203012)
hypothetical protein (203012..204121)
hypothetical protein (204108..204770)
hypothetical protein (204781..205962)
hypothetical protein (205964..206695)
hypothetical protein (206722..206844)
hypothetical protein (207335..206982)
hypothetical protein (207685..207401)
hypothetical protein (208341..208042)
hypothetical protein (209142..208774)
hypothetical protein (209904..209368)
hypothetical protein (210409..209972)
hypothetical protein (210750..210454)
hypothetical protein (211586..210885)
hypothetical protein (212182..211901)
hypothetical protein (213432..212248)
hypothetical protein (214025..213849)
hypothetical protein (214536..215480)
hypothetical protein (215579..216178)
hypothetical protein (216238..216588)
hypothetical protein (216635..216838)
hypothetical protein (217120..217440)
relE (218566..218279)
relE mRNA interferase toxin RelE (218566..218279)
relB (218805..218566)
relB Antitoxin RelB (218805..218566)
fieF (219991..219068)
fieF Ferrous-iron efflux pump FieF (219991..219068)
hypothetical protein (220763..220191)
hypothetical protein (220867..221079)
IS110 family transposase ISEsa2 (222477..221239)
IS6 family transposase IS26 (223826..223122)
hypothetical protein (223946..224146)
hypothetical protein (224136..225029)
hypothetical protein (225204..225431)
hypothetical protein (225610..225930)
hypothetical protein (226447..226758)
hypothetical protein (226763..227254)
hypothetical protein (227807..228010)
hypothetical protein (228065..228289)
hypothetical protein (228329..228529)
hypothetical protein (228752..229063)
hypothetical protein (229117..229293)
hypothetical protein (229439..229720)
hypothetical protein (229937..230542)
IS3 family transposase IS103 (230875..231396)
IS3 family transposase ISKpn8 (231393..232244)
ISNCY family transposase ISEsa1 (232419..233648)
IS6 family transposase IS26 (233660..234364)
hypothetical protein (235188..234310)
xerC_3 (236170..235157)
xerC_3 Tyrosine recombinase XerC (236170..235157)
aacA4_2 (236333..236914)
aacA4_2 Aminoglycoside N(6')-acetyltransferase type 1 (236333..236914)
hypothetical protein (236911..237036)
hypothetical protein (237120..237347)
IS1380 family transposase IS1247 (237402..238757)
yokD (238999..239808)
yokD SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD (238999..239808)
hypothetical protein (239936..240349)
hypothetical protein (240712..241143)
hypothetical protein (241224..242270)
emrE_2 (242453..242800)
emrE_2 Multidrug transporter EmrE (242453..242800)
folP_2 (242794..243633)
folP_2 Dihydropteroate synthase (242794..243633)
hypothetical protein (243761..244261)
IS6 family transposase IS26 (244337..245041)
Tn3 family transposase ISPa38 (245162..248128)
IS110 family transposase IS5075 (248207..249211)
hypothetical protein (249569..249393)
folP_3 (249899..250714)
folP_3 Dihydropteroate synthase (249899..250714)
hypothetical protein (250801..251103)
hypothetical protein (252772..251279)
hdfR (253189..252884)
hdfR HTH-type transcriptional regulator HdfR (253189..252884)
bcr (254431..253217)
bcr Bicyclomycin resistance protein (254431..253217)
hypothetical protein (255469..254648)
hypothetical protein (257056..255563)
hypothetical protein (257491..257267)
hypothetical protein (258225..257488)
hypothetical protein (258332..258823)
IS6 family transposase IS26 (259561..258857)
bla_SHV-12 (259698..260558)
bla_SHV-12 Beta-lactamase SHV-12 (259698..260558)
glpR (261340..260579)
glpR Glycerol-3-phosphate regulon repressor (261340..260579)
ltnD (261602..262504)
ltnD L-threonate dehydrogenase (261602..262504)
otnK_1 (262516..263148)
otnK_1 3-oxo-tetronate kinase (262516..263148)
otnK_2 (263145..263768)
otnK_2 3-oxo-tetronate kinase (263145..263768)
mtnB (263761..264192)
mtnB Methylthioribulose-1-phosphate dehydratase (263761..264192)
IS6 family transposase IS26 (264842..264138)
hypothetical protein (264922..265422)
cmlA (265572..266213)
cmlA Chloramphenicol acetyltransferase 2 (265572..266213)
IS6 family transposase IS26 (267061..266357)
hypothetical protein (267522..267073)
hypothetical protein (267771..267577)
hypothetical protein (268079..267768)
hypothetical protein (268381..268142)
hypothetical protein (270043..268631)
hypothetical protein (270526..270197)
IS5 family transposase IS903 (271611..270643)
hypothetical protein (271813..271613)
hypothetical protein (272655..271864)
hypothetical protein (273142..272885)
hypothetical protein (273534..273208)
hypothetical protein (274097..273777)
hypothetical protein (275642..274392)
hypothetical protein (276421..275813)
hypothetical protein (276834..276577)
hypothetical protein (277327..276899)
hypothetical protein (277796..277419)
hypothetical protein (279383..278202)
higB-1 (279688..279392)
higB-1 Toxin HigB-1 (279688..279392)
hypothetical protein (280208..279738)
hypothetical protein (283032..280642)
hypothetical protein (283685..283434)
hypothetical protein (283906..283718)
hypothetical protein (284150..283893)
hypothetical protein (284574..284143)
hypothetical protein (285202..284678)
hypothetical protein (285525..286289)
hypothetical protein (286370..287131)
hypothetical protein (287225..287488)
hypothetical protein (287532..288119)
hypothetical protein (288279..288148)
hypothetical protein (288584..291004)
hypothetical protein (292686..292030)
hypothetical protein (294170..293082)
hypothetical protein (297734..295278)
hypothetical protein (298107..298733)
hypothetical protein (299072..298791)
hypothetical protein (299514..299059)
hypothetical protein (299739..299563)
hypothetical protein (301427..299736)
hypothetical protein (301621..301367)
hypothetical protein (302838..301675)
dam (303208..304020)
dam DNA adenine methylase (303208..304020)
hypothetical protein (304880..304029)
hypothetical protein (305834..305118)
hypothetical protein (306031..305831)
hypothetical protein (307103..306051)