INTEGRALL

The Integron Database

Pseudomonas mendocina
Accession Number: MK671726
Source: blood - Italy: Milan
Journal: Unpublished
Published: 08-JUL-2019
Title: Widespread and prolonged dissemination of a successful VIM-1 encoding plasmid lineage among clinical isolates of different Pseudomonas spp
Authors: Di Pilato,V., Antonelli,A., Pollini,S., Giani,T., Rossolini,G.M.
Remarks: Class 1 integron. In1211
Promoter: PcW
Gene Product Sequence
DNA invertase (102155..102812)
RepA (1..1137)
hypothetical protein (1788..1576)
hypothetical protein (1983..2633)
hypothetical protein (2716..2928)
hypothetical protein (3692..3312)
VagC protein (3691..3927)
VapC toxin protein (3924..4361)
hypothetical protein (4368..4529)
hypothetical protein (4526..4645)
hypothetical protein (4657..4917)
hypothetical protein (4904..5317)
UPF0380 proteins YafZ-like protein (5598..6434)
hypothetical protein (6490..6918)
hypothetical protein (6935..7438)
hypothetical protein (7499..7849)
hypothetical protein (7897..8109)
hypothetical protein (8109..8483)
hypothetical protein (8765..9079)
Single-stranded DNA-binding protein (9131..9682)
hypothetical protein (10284..10168)
hypothetical protein (10919..10281)
Cholesterol oxidase (10987..12636)
Aldehyde dehydrogenase (12633..15014)
hypothetical protein (16435..15419)
hypothetical protein (16781..16425)
hypothetical protein (17112..16801)
hypothetical protein (17558..17136)
UPF0380 proteins YafZ-like protein (18444..17617)
hypothetical protein (18863..18633)
Single-stranded DNA-binding protein (19506..18931)
putative regulatory protein (19920..19531)
hypothetical protein (21468..21175)
Mobile element protein (21756..23270)
Mobile element protein (23291..24046)
Retron-type RNA-directed DNA polymerase (24935..24099)
hypothetical protein (25354..26439)
Long-chain fatty acid transport protein (27786..26500)
Transposase (30937..27908)
Resolvase/integrase Bin (31523..30921)
Phage-related protein (31715..32092)
Transcriptional regulator, Xre family (32073..32408)
hypothetical protein (32423..32758)
hypothetical protein (32782..33108)
hypothetical protein (34060..33179)
hypothetical protein (34248..34057)
hypothetical protein (35407..34340)
hypothetical protein (35674..35420)
hypothetical protein (36444..35671)
ATPase required for both assembly of type IV secretion complex and secretion of T-DNA complex, VirB4 (39094..36446)
hypothetical protein (39384..39094)
hypothetical protein (39759..39460)
Bores hole in peptidoglycan layer allowing type IV secretion complex assembly to occur (VirB1) (40807..39935)
hypothetical protein (40870..41124)
hypothetical protein (41128..41544)
hypothetical protein (41549..41860)
hypothetical protein (41871..42212)
hypothetical protein (42253..42567)
hypothetical protein (42845..43213)
hypothetical protein (43213..43563)
hypothetical protein (43567..44655)
hypothetical protein (44666..44926)
TniA putative transposase (45132..46859)
Transcriptional regulator (46955..47839)
hypothetical protein (48026..47907)
putative sugar utilization related protein (48286..48023)
hypothetical protein (49086..48697)
hypothetical protein (49245..49096)
hypothetical protein (49806..49273)
transcriptional regulator, AraC family (49924..50766)
Mobile element protein (51211..51771)
Mobile element protein (51774..54740)
hypothetical protein (54800..54928)
hypothetical protein (55430..54948)
zinc metalloproteinase Mpr protein (56344..55547)
hypothetical protein (56857..56477)
Stability protein StdB (57580..56861)
hypothetical protein (58032..57577)
hypothetical protein (58464..58847)
IncW plasmid conjugative protein TrwB (TraD-like protein) (58847..60397)
IncW plasmid conjugative relaxase protein TrwC (TraI-like protein) (60409..63345)
hypothetical protein (63919..63422)
putative nuclease (64617..63985)
Plasmid conjugative transfer endonuclease (65187..64630)
hypothetical protein (65566..65231)
Peptidoglycan hydrolase VirB1, involved in T-DNA transfer (66512..65595)
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily (67530..66496)
Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB10) (68799..67540)
Outer membrane and periplasm component of type IV secretion of T-DNA complex VirB9 (69587..68802)
Inner membrane protein forms channel for type IV secretion of T-DNA complex, VirB8 (70280..69615)
Inner membrane protein of type IV secretion of T-DNA complex, VirB6 (71143..70280)
hypothetical protein (71529..71131)
hypothetical protein (71734..71522)
Minor pilin of type IV secretion complex, VirB5 (72454..71762)
ATPase required for both assembly of type IV secretion complex and secretion of T-DNA complex, VirB4 (75135..72451)
hypothetical protein (75418..75122)
putative mating pair formation protein (75888..75427)
ParA (76894..77661)
transcriptional repressor (77672..78616)
ParR (78613..78963)
hypothetical protein (78960..79367)
hypothetical protein (79660..80094)
Resolvase (80094..80729)
Replication protein (81186..81740)
hypothetical protein (81765..82427)
hypothetical protein (82445..82735)
hypothetical protein (82728..83273)
hypothetical protein (83414..84685)
hypothetical protein (84687..85430)
Error-prone, lesion bypass DNA polymerase V (UmuC) (86733..85447)
Error-prone repair protein UmuD (87154..86723)
ATP-dependent DNA ligase (87293..88255)
Mobile element protein (89063..88308)
Mobile element protein (90598..89084)
hypothetical protein (90981..91682)
hypothetical protein (91693..91953)
TniA putative transposase (92122..93837)
TniB NTP-binding protein (93840..94739)
puromycin N-acetyltransferase-like protein (95296..94796)
Dihydropteroate synthase type-2 (96290..95424)
hypothetical protein (96728..96534)
Streptomycin 3''-O-adenylyltransferase (97507..96728)
6'-N-acetyltransferase (98215..97589)
Streptomycin 3''-O-adenylyltransferase (99288..98251)
Putative transposase (100516..99980)
hypothetical protein (100923..100528)
hypothetical protein (101171..100920)
Phage DNA invertase (101353..101919)
hypothetical protein (102010..102216)