INTEGRALL

The Integron Database

Vibrio cholerae O395
Accession Number: NC_012583
Source: n.m.
Journal: PLoS ONE 3 (12), E4053 (2008)
Published: 21-APR-2009
Title: A recalibrated molecular clock and independent origins for the cholera pandemic clones
Authors: Feng,L., Reeves,P.R., Lan,R., Ren,Y., Gao,C., Zhou,Z., Ren,Y., Cheng,J., Wang,W., Wang,J., Qian,W., Li,D., Wang,L.
Remarks:
Gene:
ttacaaattggaaagcgggtttcgtgtgatcgcgtctgacaaatggtcgggggcaaagtgcgaataacgcatcgtcatcgagatatccgcatggccgagaacgtctcttagcaccagaat
attgccgccattcatcataaagtggctggcgaaggtgtgacgcaatacgtgagaagcttgcccagatggaagagtgatcccgagcttattttttagaatgtagcaaaacggtgtatagca
ctcttcaaacaaacggccagaagtgggcttatatatctcctcgtagagttcacgagaaatgggtactgtcctgttcttcttggttttagtgttcgtgtaggtaattttatactcggatag
ctggctaccccgcagttttgccgcctcattccagcgtgcgccagttgaaaggcaaatcttaacaatcttgagcatgtcagcaatttcgtgttgagcaactaactcaagcagcagtttgat
ttgctcggtggtgaggaaagacatctccctttcagattccctaaatggctttacgtcatcaagtgggttcggtgcattccattcacccagttctttcagtttattgaataccgctttaaa
acgtgccagctcagaattcatggttgaaatgctgggtttgcctcgattccaacggccatcaacaaaaataagctcgccggacatacgtctgcttcggaagtctgaataagtttttgctga
aaaggtggctgcgatagggttgcccatcgcattcaccatgtggtgaaacttttgaatgatcacatcaccattcactaatgtacgaccgtaatgcgagtaccataattcaacaatgtcact
cagccgcctattatcaggcttactccccatccacggtttatcatccacctcacgcatgatgaagttttcataagcggtggcctcacctttggtggcgaatcttttacgcacgcgcttacc
ttcgcggccttgcgggtaacactcgcaaagccacggttttttgctgccatctttaagattgcgaacggacat
Protein:
MSVRNLKDGSKKPWLCECYPQGREGKRVRKRFATKGEATAYENFIMREVDDKPWMGSKPDNRRLSDIVELWYSHYGRTLVNGDVIIQKFHHMVNAMGNPIAATFSAKTYSDFRSRRMSGE
LIFVDGRWNRGKPSISTMNSELARFKAVFNKLKELGEWNAPNPLDDVKPFRESEREMSFLTTEQIKLLLELVAQHEIADMLKIVKICLSTGARWNEAAKLRGSQLSEYKITYTNTKTKKN
RTVPISRELYEEIYKPTSGRLFEECYTPFCYILKNKLGITLPSGQASHVLRHTFASHFMMNGGNILVLRDVLGHADISMTMRYSHFAPDHLSDAITRNPLSNL